RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 C15orf40Q8WUR7 153 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 FAM234AQ9H0X4 552 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 DUX4Q9UBX2 424 aa13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ELF5Q9UKW6 265 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-228ENST00000583363 UBE2QL1A1L167 161 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 TMEM235A6NFC5 223 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 NKX6-3A6NJ46 265 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 CEACAM18A8MTB9 384 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 SERPINE3A8MV23 424 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 VWC2LB2RUY7 222 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 TMPRSS2O15393 492 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ADAM20O43506 726 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 CA11O75493 328 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 TK1P04183 234 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 WNT2P09544 360 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 PTHLHP12272 177 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 OR3A1P47881 315 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 KCNJ3P48549 501 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 IL13RA1P78552 427 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ZNF79Q15937 498 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 HACD4Q5VWC8 232 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 SNX29P2Q8IUI4 249 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 SPICQ8N5J4 248 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 FAM216BQ8N7L0 139 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 OR5D13Q8NGL4 314 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 TSC22D3Q99576 134 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 PIMREGQ9BSJ6 248 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 BPESC1Q9GZL8 116 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 CHST6Q9GZX3 395 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 PPA2Q9H2U2 334 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 MIOXQ9UGB7 285 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 AK3Q9UIJ7 227 aa13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 NSD1Q96L73 2696 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP3-228ENST00000583363 HSPB6O14558 160 aa13.59□□□□□ -0.23
CDK5RAP3-228ENST00000583363 CTDSPLO15194 276 aa13.59□□□□□ -0.23
CDK5RAP3-228ENST00000583363 SELLP14151 372 aa13.59□□□□□ -0.23
CDK5RAP3-228ENST00000583363 PRSS3P35030 304 aa13.59□□□□□ -0.23
CDK5RAP3-228ENST00000583363 CLEC12BQ2HXU8 276 aa13.59□□□□□ -0.23
CDK5RAP3-228ENST00000583363 PRSS57Q6UWY2 283 aa13.59□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ASCC1Q8N9N2 400 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-228ENST00000583363 SRRQ9GZT4 340 aa13.59□□□□□ -0.23
CDK5RAP3-228ENST00000583363 PATZ1Q9HBE1 687 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-228ENST00000583363 ETAA1Q9NY74 926 aa13.59□□□□□ -0.23
CDK5RAP3-228ENST00000583363 CTSZQ9UBR2 303 aa13.59□□□□□ -0.23
CDK5RAP3-228ENST00000583363 IGHV4-30-2A0A087WSY4 118 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 MEIOCA2RUB1 952 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 SULT1C2O00338 296 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 MGST3O14880 152 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 NDUFB3O43676 98 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 FCN3O75636 299 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 CSN2P05814 226 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 PAX5Q02548 391 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 ARFRP1Q13795 201 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 ZNF846Q147U1 533 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 GRK1Q15835 563 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 PYDC2Q56P42 97 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 ZNF841Q6ZN19 808 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 KRTAP1-3Q8IUG1 177 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 OR8H2Q8N162 312 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 GAPTQ8N292 157 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 PLPPR1Q8TBJ4 325 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 NEK7Q8TDX7 302 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 DYRK2Q92630 601 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 SDHCQ99643 169 aaPredicted RBP13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 CMSS1Q9BQ75 279 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 PCDHB10Q9UN67 800 aa13.58□□□□□ -0.24
CDK5RAP3-228ENST00000583363 FN1P02751 2386 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 F5H0A9 414 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 DVL1O14640 695 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 GSTZ1O43708 216 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 SSX5O60225 188 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 MT-ND4P03905 459 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 CD3GP09693 182 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 ERP29P30040 261 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 PPP5CP53041 499 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 GNG2P59768 71 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 MRPS10P82664 201 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 GUCA2AQ02747 115 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 AESQ08117 197 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 LRRC10Q5BKY1 277 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 RSBN1Q5VWQ0 802 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 SLC35E4Q6ICL7 350 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 ZNF497Q6ZNH5 498 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 GDPD1Q8N9F7 314 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 TMEM185AQ8NFB2 350 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 GPX8Q8TED1 209 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 GCDHQ92947 438 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 NEIL1Q96FI4 390 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 COQ2Q96H96 371 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 C18orf12Q96KH6 178 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 WDR12Q9GZL7 423 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 RIMS4Q9H426 269 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 NCOR1P1Q9H4R4 102 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 SCPEP1Q9HB40 452 aa13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 SLC25A10Q9UBX3 287 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-228ENST00000583363 GABARAPH6UMI1 98 aa13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 NAPSAO96009 420 aa13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 RPS2P15880 293 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 CD40LGP29965 261 aa13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 LMO4P61968 165 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms