RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	RFESD	Q8TAC1	157 aa		9.24	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	TRUB1	Q8WWH5	349 aa	Known RBP	9.24	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	KIRREL1	Q96J84	757 aa		9.24	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	NOL4L	Q96MY1	436 aa	Predicted RBP	9.24	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	PDCD1LG2	Q9BQ51	273 aa		9.24	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	CALY	Q9NYX4	217 aa		9.24	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	9.24	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	ZNF581	Q9P0T4	197 aa		9.24	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	KIF25	Q9UIL4	384 aa		9.24	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	LINC00527	Q9UJ94	153 aa		9.24	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	MOB4	Q9Y3A3	225 aa		9.24	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	ORC6	Q9Y5N6	252 aa		9.24	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	HSPE1-MOB4	S4R3N1	261 aa		9.24	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	KBTBD11-OT1	A0A1B0GTJ5	212 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114		A0A1W2PPE3	182 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	PSMB11	A5LHX3	300 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114		E9PI62	339 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	SULT1B1	O43704	296 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	CLIC3	O95833	236 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	ALPL	P05186	524 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	CSN2	P05814	226 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	CCDC159	P0C7I6	412 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	FAM106CP	P0CH98	169 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	SNRPG	P62308	76 aa	Known RBP	9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	PIGY	Q3MUY2	71 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	ZNF691	Q5VV52	312 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	SAXO1	Q8IYX7	474 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	OSR2	Q8N2R0	312 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	DRAM1	Q8N682	238 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	OR9G1	Q8NH87	305 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	MRGPRD	Q8TDS7	321 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	TSEN15	Q8WW01	171 aa	Known RBP	9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	CREB3L1	Q96BA8	519 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	RCC1L	Q96I51	464 aa	Known RBP	9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	FAM192A	Q9GZU8	254 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	AMBN	Q9NP70	447 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	IDI2-AS1	Q9NZ38	188 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	OR6C3	Q9NZP0	311 aa		9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	EXOG	Q9Y2C4	368 aa	Known RBP	9.23	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114		A0A087X0M5	115 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	TRAV24	A0A0B4J272	114 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114		A0A1B0GX30	115 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114		J3QR06	171 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	DYNC1I1	O14576	645 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	ZFPL1	O95159	310 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	TMEM11	P17152	192 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	SSTR5	P35346	364 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	SOX2	P48431	317 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	MTNR1B	P49286	362 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	GALE	Q14376	348 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	SLC25A30	Q5SVS4	291 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	MEDAG	Q5VYS4	303 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	ETV3L	Q6ZN32	361 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	SERPINA12	Q8IW75	414 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	LINC00482	Q8N8I6	264 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	OR51A2	Q8NGJ7	313 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	OR51T1	Q8NGJ9	327 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	OR5D14	Q8NGL3	314 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	OR5AK2	Q8NH90	309 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	CNIH3	Q8TBE1	160 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	PLPPR1	Q8TBJ4	325 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	TNFAIP8L1	Q8WVP5	186 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	GPER1	Q99527	375 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	RHOF	Q9HBH0	211 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	FAM53C	Q9NYF3	392 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	DHDH	Q9UQ10	334 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	PSG11	Q9UQ72	335 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114	GMPPB	Q9Y5P6	360 aa		9.22	□□□□□ -0.93
CDK5RAP3-223	ENST00000582114		A0A1W2PPI3	338 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	TMEM212	A6NML5	194 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	NUDT19	A8MXV4	375 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	OOSP1	A8MZH6	123 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114		M0QZK8	103 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	GABRP	O00591	440 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	ATP5H	O75947	161 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	HTR3B	O95264	441 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	IL1A	P01583	271 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	IGKV1D-33	P01593	117 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	IGKV1-33	P01594	117 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	CGB3	P0DN86	165 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	CGB7	P0DN87	165 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	DBT	P11182	482 aa	Known RBP	9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	C21orf33	P30042	268 aa	Predicted RBP	9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	REG1B	P48304	166 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	RSU1	Q15404	277 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	VAX1	Q5SQQ9	334 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	RSBN1	Q5VWQ0	802 aa	Predicted RBP	9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	C8orf86	Q6ZUL3	223 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	MRPL41	Q8IXM3	137 aa	Known RBP	9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	CBR4	Q8N4T8	237 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	PARP16	Q8N5Y8	322 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	C5orf56	Q8N8D9	126 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	ZNF565	Q8N9K5	539 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	OR10X1	Q8NGY0	326 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	UBALD1	Q8TB05	177 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	MRPL48	Q96GC5	212 aa	Known RBP	9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	DUX3	Q96PT4	197 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	TAS2R4	Q9NYW5	299 aa		9.21	□□□□□ -0.94
CDK5RAP3-223	ENST00000582114	IGHV3-72	A0A0B4J1Y9	119 aa		9.2	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms