RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 BOLA1Q9Y3E2 137 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 HEATR1Q9H583 2144 aaKnown RBP12.37□□□□□ -0.43
MKS1-211ENST00000581761 IGLV3-9A0A075B6K5 115 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 hCG_1807616A0A1W2PRN6 198 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 ZSCAN5BA6NJL1 495 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 SH2D1BO14796 132 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 SLC22A5O76082 557 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 OR2H2O95918 312 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 PPP3CBP16298 524 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 VAMP1P23763 118 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 SELENOVP59797 346 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 IL13RA1P78552 427 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 BAMBIQ13145 260 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 MPPED2Q15777 294 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 SPIN3Q5JUX0 258 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 WDR82Q6UXN9 313 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 Q6ZS49 121 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 TMEM185AQ8NFB2 350 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 NUP37Q8NFH4 326 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 OR2T35Q8NGX2 323 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 MRPL30Q8TCC3 161 aaKnown RBP12.37□□□□□ -0.43
MKS1-211ENST00000581761 CASTOR1Q8WTX7 329 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 TMEM230Q96A57 120 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 FXYD6Q9H0Q3 95 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 WDR13Q9H1Z4 485 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 HES4Q9HCC6 221 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 PLSCR3Q9NRY6 295 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 C1orf123Q9NWV4 160 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 OR14J1Q9UGF5 321 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 GLS2Q9UI32 602 aa12.37□□□□□ -0.43
MKS1-211ENST00000581761 CELSR2Q9HCU4 2923 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 TRBV6-6A0A0A6YYG2 114 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 PLSCR5A0PG75 271 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 DPRXA6NFQ7 191 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 CYSRT1A8MQ03 144 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 CCL21O00585 134 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 WNT9BO14905 357 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 OR2A4O95047 310 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 SFT2D2O95562 160 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 HAND1O96004 215 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 CTSDP07339 412 aaPredicted RBP12.36□□□□□ -0.43
MKS1-211ENST00000581761 PI3P19957 117 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 GLRA1P23415 457 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 FCGR2CP31995 323 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 MDH2P40926 338 aaKnown RBP12.36□□□□□ -0.43
MKS1-211ENST00000581761 DHODHQ02127 395 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 ZNF146Q15072 292 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 TMEM128Q5BJH2 165 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 ZNF660Q6AZW8 331 aaPredicted RBP12.36□□□□□ -0.43
MKS1-211ENST00000581761 ELMOD3Q96FG2 381 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 OR2A7Q96R45 310 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 PHB2Q99623 299 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 RTBDNQ9BSG5 229 aaPredicted RBP12.36□□□□□ -0.43
MKS1-211ENST00000581761 TMPRSS13Q9BYE2 586 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 MRPL37Q9BZE1 423 aaKnown RBP12.36□□□□□ -0.43
MKS1-211ENST00000581761 MGAT4AQ9UM21 535 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 ATP23Q9Y6H3 246 aa12.36□□□□□ -0.43
MKS1-211ENST00000581761 TEX15Q9BXT5 2789 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 DOPEY1Q5JWR5 2465 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 KIR2DS1A0A191URI9 304 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 FAM90A27PA6NNH2 459 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 TRDCB7Z8K6 153 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 SLC33A1O00400 549 aaPredicted RBP12.35□□□□□ -0.43
MKS1-211ENST00000581761 ABCD4O14678 606 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 SPRY3O43610 288 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 ZNF728P0DKX0 622 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 KIR2DS4P43632 304 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 FXYD4P59646 89 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 HERV-K104P61576 105 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 BSPH1Q075Z2 132 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 KIR2DS1Q14954 304 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 C4orf17Q53FE4 359 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 DCAF12L2Q5VW00 463 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 LIN54Q6MZP7 749 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 DHRS11Q6UWP2 260 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 ACP7Q6ZNF0 438 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 LRRC29Q8WV35 223 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 MITD1Q8WV92 249 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 TOMM40LQ969M1 308 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 MRPL24Q96A35 216 aaKnown RBP12.35□□□□□ -0.43
MKS1-211ENST00000581761 MEGF10Q96KG7 1140 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 DHRS9Q9BPW9 319 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 CLEC4MQ9H2X3 399 aaPredicted RBP12.35□□□□□ -0.43
MKS1-211ENST00000581761 LIME1Q9H400 295 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 NGBQ9NPG2 151 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 UNC79Q9P2D8 2635 aa12.35□□□□□ -0.43
MKS1-211ENST00000581761 ICE1Q9Y2F5 2266 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 H7C1Q1 480 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 ZNF205O95201 554 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 DUS4LO95620 317 aaKnown RBP12.34□□□□□ -0.43
MKS1-211ENST00000581761 AADACP22760 399 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 CEBPDP49716 269 aaPredicted RBP12.34□□□□□ -0.43
MKS1-211ENST00000581761 HLA-DRB3P79483 266 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 SLC9A3R2Q15599 337 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 IGSF11Q5DX21 431 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 SHEQ5VZ18 495 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 LPCAT3Q6P1A2 487 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 ZNF880Q6PDB4 577 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 KCTD9Q7L273 389 aa12.34□□□□□ -0.43
MKS1-211ENST00000581761 C9orf62Q8N4C0 152 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms