RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 LINC00312Q9Y6C7 94 aa11.48□□□□□ -0.57
LINC01543-201ENST00000578367 A0A0B4J203 849 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 A0A1B0GW55 424 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 hCG_1809904A0A1W2PP81 198 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 A0A1W2PPE2 198 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 A0A1W2PR64 198 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 A0A1W2PRV1 198 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 TMEM30CPA0ZSE6 113 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 M0R1W7 72 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 PHF1O43189 567 aaPredicted RBP11.47□□□□□ -0.57
LINC01543-201ENST00000578367 FCN3O75636 299 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 TGFAP01135 160 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 DUX4L2P0CJ85 424 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 DUX4L3P0CJ86 424 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 DUX4L4P0CJ87 422 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 DUX4L5P0CJ88 424 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 DUX4L6P0CJ89 424 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 DUX4L7P0CJ90 424 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 SELLP14151 372 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 GZMHP20718 246 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 VEGFCP49767 419 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 EFNB2P52799 333 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 TMEM50BP56557 158 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 LCN2P80188 198 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 CR1LQ2VPA4 569 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 KRBOX4Q5JUW0 171 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 RSBN1Q5VWQ0 802 aaPredicted RBP11.47□□□□□ -0.57
LINC01543-201ENST00000578367 TRAT1Q6PIZ9 186 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 DUX4L9Q6RFH8 374 aaPredicted RBP11.47□□□□□ -0.57
LINC01543-201ENST00000578367 CMTM4Q8IZR5 234 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 ZNF565Q8N9K5 539 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 SLC25A38Q96DW6 304 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 NICN1Q9BSH3 213 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 SLIRPQ9GZT3 109 aaKnown RBP11.47□□□□□ -0.57
LINC01543-201ENST00000578367 NXF2Q9GZY0 626 aaKnown RBP11.47□□□□□ -0.57
LINC01543-201ENST00000578367 ATG5Q9H1Y0 275 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 PPA2Q9H2U2 334 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 KCNK15Q9H427 330 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 HIF1ANQ9NWT6 349 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 ETAA1Q9NY74 926 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 TAS2R3Q9NYW6 316 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 DUX4Q9UBX2 424 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 ADAM30Q9UKF2 790 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 MGAT4AQ9UM21 535 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 UBE2J1Q9Y385 318 aaPredicted RBP11.47□□□□□ -0.57
LINC01543-201ENST00000578367 INSIG2Q9Y5U4 225 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 MALRD1Q5VYJ5 2156 aa11.47□□□□□ -0.57
LINC01543-201ENST00000578367 VPS13CQ709C8 3753 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 TRGV10A0A0A0MS01 117 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 A0A0A6YYD4 124 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 TRBV6-6A0A0A6YYG2 114 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 ODAMA1E959 279 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 C22orf46C9J442 243 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 SMAD7O15105 426 aaKnown RBP11.46□□□□□ -0.57
LINC01543-201ENST00000578367 SOCS1O15524 211 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 XRCC3O43542 346 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 GSTP1P09211 210 aaKnown RBP11.46□□□□□ -0.57
LINC01543-201ENST00000578367 HIST1H1DP16402 221 aaKnown RBP11.46□□□□□ -0.57
LINC01543-201ENST00000578367 EDDM3BP56851 147 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 PITPNAQ00169 270 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 PAX8Q06710 450 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 PDCD1Q15116 288 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 PNLIPRP3Q17RR3 467 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 TMEM30BQ3MIR4 351 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 ZNF497Q6ZNH5 498 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 SAMD12Q8N8I0 201 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 MAPK1IP1LQ8NDC0 245 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 OR5H6Q8NGV6 325 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 NEK7Q8TDX7 302 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 C15orf40Q8WUR7 153 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 H1FXQ92522 213 aaKnown RBP11.46□□□□□ -0.57
LINC01543-201ENST00000578367 CHST6Q9GZX3 395 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 MMP27Q9H306 513 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 UNKLQ9H9P5 680 aaKnown RBP11.46□□□□□ -0.57
LINC01543-201ENST00000578367 COMMD3Q9UBI1 195 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 OPN4Q9UHM6 478 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 KCNS2Q9ULS6 477 aa11.46□□□□□ -0.57
LINC01543-201ENST00000578367 MAP1AP78559 2803 aaPredicted RBP11.46□□□□□ -0.58
LINC01543-201ENST00000578367 MAST4O15021 2626 aa11.46□□□□□ -0.58
LINC01543-201ENST00000578367 MFNGO00587 321 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 CLPXO76031 633 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 MT-ND4P03905 459 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 TFF1P04155 84 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 MELTFP08582 738 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 MNDAP41218 407 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 AESQ08117 197 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 PLA2G7Q13093 441 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 SRSF7Q16629 238 aaKnown RBP eCLIP11.45□□□□□ -0.58
LINC01543-201ENST00000578367 NKAPLQ5M9Q1 402 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 DCAF12L2Q5VW00 463 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 TMEM200BQ69YZ2 307 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 MOB1BQ7L9L4 216 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 C6orf201Q7Z4U5 140 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 BPIFB2Q8N4F0 458 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 OR10A7Q8NGE5 316 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 COQ2Q96H96 371 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 ARHGAP5-AS1Q96IT6 56 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 PECRQ9BY49 303 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 GAL3ST2Q9H3Q3 398 aa11.45□□□□□ -0.58
LINC01543-201ENST00000578367 LINC00574Q9H8X3 128 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms