RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 UBE2QL1A1L167 161 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 FOXI3A8MTJ6 420 aaPredicted RBP8.56□□□□□ -1.04
SS18-207ENST00000577636 ATP6V1G2-DDX39BF2Z307 99 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 NDUFS8O00217 210 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 GEMIN2O14893 280 aaKnown RBP8.56□□□□□ -1.04
SS18-207ENST00000577636 KCNAB3O43448 404 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 SSNA1O43805 119 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 IGKV1D-12P01611 117 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 CD74P04233 296 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 RLN1P04808 185 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 FCER2P06734 321 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 GRPP07492 148 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 SFTPBP07988 381 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 PRKACAP17612 351 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 BCL3P20749 454 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 MPZP25189 248 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 TMEM50BP56557 158 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 ARPC4P59998 168 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 TSPAN5P62079 268 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 RBM39Q14498 530 aaKnown RBP8.56□□□□□ -1.04
SS18-207ENST00000577636 MST1LQ2TV78 715 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 PIGYQ3MUY2 71 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 SCGB2B2Q4G0G5 96 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 NHLRC3Q5JS37 347 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 METTL11BQ5VVY1 283 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 VHLLQ6RSH7 139 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 IDO2Q6ZQW0 420 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 C6orf201Q7Z4U5 140 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 GLCCI1Q86VQ1 547 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 HOGA1Q86XE5 327 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 FAM58AQ8N1B3 248 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 ARRDC1Q8N5I2 433 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 Q8NFD4 153 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 BEST4Q8NFU0 473 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 OR51S1Q8NGJ8 323 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 NEK7Q8TDX7 302 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 ST8SIA4Q92187 359 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 SCGB3A2Q96PL1 93 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 ST6GALNAC5Q9BVH7 336 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 MED28Q9H204 178 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 CHMP1AQ9HD42 196 aaPredicted RBP8.56□□□□□ -1.04
SS18-207ENST00000577636 C12orf4Q9NQ89 552 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 ING3Q9NXR8 418 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 KCNK7Q9Y2U2 307 aa8.56□□□□□ -1.04
SS18-207ENST00000577636 MCRIP1C9JLW8 97 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 M0QYG6 137 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 ARPC1BO15143 372 aaKnown RBP8.55□□□□□ -1.04
SS18-207ENST00000577636 SSX5O60225 188 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 LILRA1O75019 489 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 NXPH2O95156 264 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 VENTXO95231 258 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 CSN2P05814 226 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 GLAP06280 429 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 ZNF250P15622 560 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 TNFSF4P23510 183 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 DTYMKP23919 212 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 CHATP28329 748 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 SNU13P55769 128 aaKnown RBP8.55□□□□□ -1.04
SS18-207ENST00000577636 SNRPD2P62316 118 aaKnown RBP8.55□□□□□ -1.04
SS18-207ENST00000577636 CBX3Q13185 183 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 IKZF1Q13422 519 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 IL13RA2Q14627 380 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 SWI5Q1ZZU3 235 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 TMEM255AQ5JRV8 349 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 FAAP20Q6NZ36 180 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 GVQW1Q8N7I0 195 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 C3orf56Q8N813 242 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 SCCPDHQ8NBX0 429 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 NUP37Q8NFH4 326 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 OR10AD1Q8NGE0 317 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 GIMAP1Q8WWP7 306 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 SNAPC3Q92966 411 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 NEURL2Q9BR09 285 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 FAAP24Q9BTP7 215 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 TINAGL1Q9GZM7 467 aaPredicted RBP8.55□□□□□ -1.04
SS18-207ENST00000577636 RIMS4Q9H426 269 aaPredicted RBP8.55□□□□□ -1.04
SS18-207ENST00000577636 MTCH1Q9NZJ7 389 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 ZNF221Q9UK13 617 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 ELF5Q9UKW6 265 aaPredicted RBP8.55□□□□□ -1.04
SS18-207ENST00000577636 FZR1Q9UM11 496 aa8.55□□□□□ -1.04
SS18-207ENST00000577636 A0A0A6YYJ9 748 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 A6NLC8 198 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 CDIPTO14735 213 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 SH2D1BO14796 132 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 DEGS1O15121 323 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 SYNGR1O43759 233 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 CREBL2O60519 120 aaPredicted RBP8.54□□□□□ -1.04
SS18-207ENST00000577636 IGHV3-13P01766 116 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 PMP2P02689 132 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 ACAA1P09110 424 aaPredicted RBP8.54□□□□□ -1.04
SS18-207ENST00000577636 EGR1P18146 543 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 NAT1P18440 290 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 IL2RGP31785 369 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 HRH1P35367 487 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 SERPINF1P36955 418 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 NPBWR2P48146 333 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 RRAS2P62070 204 aaPredicted RBP8.54□□□□□ -1.04
SS18-207ENST00000577636 NKPD1Q17RQ9 610 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 FAM76BQ5HYJ3 339 aa8.54□□□□□ -1.04
SS18-207ENST00000577636 SPIN3Q5JUX0 258 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms