RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 E9PI62 339 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 M0QZK8 103 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 OR2F2O95006 317 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 JUNBP17275 347 aaPredicted RBP11.96□□□□□ -0.49
MKS1-205ENST00000577315 DCKP27707 260 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 PAX5Q02548 391 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 ATXN7L3Q14CW9 347 aaPredicted RBP11.96□□□□□ -0.49
MKS1-205ENST00000577315 TPTE2P1Q5T6R2 138 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 ZNF529Q6P280 563 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 TMPRSS11AQ6ZMR5 421 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 SATL1Q86VE3 508 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 Q8NFD4 153 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 OR10A7Q8NGE5 316 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 CNIH3Q8TBE1 160 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 TNFAIP8L1Q8WVP5 186 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 RBM14Q96PK6 669 aaKnown RBP11.96□□□□□ -0.49
MKS1-205ENST00000577315 OR5M11Q96RB7 305 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 CITED2Q99967 270 aaPredicted RBP11.96□□□□□ -0.49
MKS1-205ENST00000577315 SLC25A33Q9BSK2 321 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 MMP28Q9H239 520 aa11.96□□□□□ -0.49
MKS1-205ENST00000577315 PRKDCP78527 4128 aaKnown RBP11.95□□□□□ -0.5
MKS1-205ENST00000577315 EBAG9O00559 213 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 GABRPO00591 440 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 LIMS3P0CW19 117 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 LIMS4P0CW20 117 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 CGB3P0DN86 165 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 CGB7P0DN87 165 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 CD83Q01151 205 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 MED21Q13503 144 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 RSU1Q15404 277 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 C17orf58Q2M2W7 97 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 BAIAP2L2Q6UXY1 529 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 ASCL4Q6XD76 172 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 Q6ZS46 218 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 SLC16A12Q6ZSM3 486 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 CENPVQ7Z7K6 275 aaPredicted RBP11.95□□□□□ -0.5
MKS1-205ENST00000577315 LYG1Q8N1E2 194 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 OR5AU1Q8NGC0 362 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 APH1BQ8WW43 257 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 KIRREL1Q96J84 757 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 NR1H4Q96RI1 486 aaPredicted RBP11.95□□□□□ -0.5
MKS1-205ENST00000577315 FAM192AQ9GZU8 254 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 PAK1IP1Q9NWT1 392 aaPredicted RBP11.95□□□□□ -0.5
MKS1-205ENST00000577315 ING3Q9NXR8 418 aa11.95□□□□□ -0.5
MKS1-205ENST00000577315 SMPD3Q9NY59 655 aaPredicted RBP11.95□□□□□ -0.5
MKS1-205ENST00000577315 MEIKINA0A087WXM9 373 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 FAM172BPA6NC97 362 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 LY6LH3BQJ8 138 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 IL1AP01583 271 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 FAM106CPP0CH98 169 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 NFYBP25208 207 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 GDNFP39905 211 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 GLP1RP43220 463 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 SOX2P48431 317 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 PPP3R1P63098 170 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 ZSCAN26Q16670 478 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 HIST2H2BDQ6DRA6 164 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 LINC00596Q86U02 117 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 THNSL2Q86YJ6 484 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 OR4X2Q8NGF9 303 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 RPEQ96AT9 228 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 S100A13Q99584 98 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 METTL9Q9H1A3 318 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 PPIL3Q9H2H8 161 aaKnown RBP11.94□□□□□ -0.5
MKS1-205ENST00000577315 LINC00574Q9H8X3 128 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 TMEM138Q9NPI0 162 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 CALYQ9NYX4 217 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 IDI2-AS1Q9NZ38 188 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 IL36GQ9NZH8 169 aa11.94□□□□□ -0.5
MKS1-205ENST00000577315 EXOSC1Q9Y3B2 195 aaKnown RBP11.94□□□□□ -0.5
MKS1-205ENST00000577315 TRAV24A0A0B4J272 114 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 ADARB2-AS1A8MUL3 147 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 J3QR06 171 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 ZNF780AO75290 641 aaPredicted RBP11.93□□□□□ -0.5
MKS1-205ENST00000577315 WBP4O75554 376 aaKnown RBP11.93□□□□□ -0.5
MKS1-205ENST00000577315 HTR3BO95264 441 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 CSTBP04080 98 aaKnown RBP11.93□□□□□ -0.5
MKS1-205ENST00000577315 MYL12AP19105 171 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 OR3A4PP47883 348 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 GTF2A1P52655 376 aaPredicted RBP11.93□□□□□ -0.5
MKS1-205ENST00000577315 RBM39Q14498 530 aaKnown RBP11.93□□□□□ -0.5
MKS1-205ENST00000577315 TMEM95Q3KNT9 176 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 ABCA11PQ4W5N1 156 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 NHLRC3Q5JS37 347 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 OR51A2Q8NGJ7 313 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 TOMM40LQ969M1 308 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 TMEM106AQ96A25 262 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 IFT22Q9H7X7 185 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 C8orf4Q9NR00 106 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 CHCHD3Q9NX63 227 aaKnown RBP11.93□□□□□ -0.5
MKS1-205ENST00000577315 TAS2R4Q9NYW5 299 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 KIF25Q9UIL4 384 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 ZNF281Q9Y2X9 895 aa11.93□□□□□ -0.5
MKS1-205ENST00000577315 TSSC4Q9Y5U2 329 aaPredicted RBP11.93□□□□□ -0.5
MKS1-205ENST00000577315 FAM90A18PA6NE21 464 aa11.92□□□□□ -0.5
MKS1-205ENST00000577315 FAM90A16PA6NEW6 464 aa11.92□□□□□ -0.5
MKS1-205ENST00000577315 FAM90A20PA6NIJ5 464 aa11.92□□□□□ -0.5
MKS1-205ENST00000577315 FAM90A9PA6NNJ1 464 aa11.92□□□□□ -0.5
MKS1-205ENST00000577315 FAM90A12PA8MX19 464 aa11.92□□□□□ -0.5
MKS1-205ENST00000577315 FAM90A5PA8MXJ8 464 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms