RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 RNF144BQ7Z419 303 aa5□□□□□ -1.61
NUP88-212ENST00000576708 KCTD20Q7Z5Y7 419 aa5□□□□□ -1.61
NUP88-212ENST00000576708 AMIGO2Q86SJ2 522 aa5□□□□□ -1.61
NUP88-212ENST00000576708 RDH10Q8IZV5 341 aa5□□□□□ -1.61
NUP88-212ENST00000576708 YIPF7Q8N8F6 280 aa5□□□□□ -1.61
NUP88-212ENST00000576708 ASCC1Q8N9N2 400 aaKnown RBP5□□□□□ -1.61
NUP88-212ENST00000576708 OR52N4Q8NGI2 321 aa5□□□□□ -1.61
NUP88-212ENST00000576708 TMEM163Q8TC26 289 aa5□□□□□ -1.61
NUP88-212ENST00000576708 SLAMF9Q96A28 289 aa5□□□□□ -1.61
NUP88-212ENST00000576708 CDCA4Q9BXL8 241 aa5□□□□□ -1.61
NUP88-212ENST00000576708 NPFFR1Q9GZQ6 430 aa5□□□□□ -1.61
NUP88-212ENST00000576708 MMP28Q9H239 520 aa5□□□□□ -1.61
NUP88-212ENST00000576708 TMPRSS5Q9H3S3 457 aa5□□□□□ -1.61
NUP88-212ENST00000576708 HES4Q9HCC6 221 aa5□□□□□ -1.61
NUP88-212ENST00000576708 KRT84Q9NSB2 600 aa5□□□□□ -1.61
NUP88-212ENST00000576708 SERTAD4Q9NUC0 356 aa5□□□□□ -1.61
NUP88-212ENST00000576708 CLN6Q9NWW5 311 aa5□□□□□ -1.61
NUP88-212ENST00000576708 MTCH1Q9NZJ7 389 aa5□□□□□ -1.61
NUP88-212ENST00000576708 POLDIP2Q9Y2S7 368 aa5□□□□□ -1.61
NUP88-212ENST00000576708 HILPDAQ9Y5L2 63 aa5□□□□□ -1.61
NUP88-212ENST00000576708 TMEM14AQ9Y6G1 99 aa5□□□□□ -1.61
NUP88-212ENST00000576708 A0A1W2PQL4 384 aaPredicted RBP4.99□□□□□ -1.61
NUP88-212ENST00000576708 ODF3BA8MYP8 253 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 G3V2T6 193 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 KRT8P05787 483 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 ZNF728P0DKX0 622 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 IGHV1-8P0DP01 117 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 CCL1P22362 96 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 CD24P25063 80 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 KIR3DL2P43630 455 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 NPBWR2P48146 333 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 IL24Q13007 206 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 AANATQ16613 207 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 ZNF674Q2M3X9 581 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 DNAL1Q4LDG9 190 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 AARDQ4LEZ3 155 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 TP53I3Q53FA7 332 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 UTF1Q5T230 341 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 KPRPQ5T749 579 aaPredicted RBP4.99□□□□□ -1.61
NUP88-212ENST00000576708 NXNL2Q5VZ03 156 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 ZNF626Q68DY1 528 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 Q6ZSR3 168 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 SLC25A26Q70HW3 274 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 GDPD3Q7L5L3 318 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 CATSPERDQ86XM0 798 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 PRSS35Q8N3Z0 413 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 Q8NFD4 153 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 OR10H4Q8NGA5 316 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 LINC00476Q8WZB0 136 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 CEP19Q96LK0 163 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 ATP6V0BQ99437 205 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 CITED2Q99967 270 aaPredicted RBP4.99□□□□□ -1.61
NUP88-212ENST00000576708 OSBPL10Q9BXB5 764 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 PKIBQ9C010 78 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 CHST6Q9GZX3 395 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 RANBP3Q9H6Z4 567 aaPredicted RBP4.99□□□□□ -1.61
NUP88-212ENST00000576708 MOB1AQ9H8S9 216 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 RBFOX1Q9NWB1 397 aaKnown RBP4.99□□□□□ -1.61
NUP88-212ENST00000576708 TAS2R3Q9NYW6 316 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 TCF19Q9Y242 345 aa4.99□□□□□ -1.61
NUP88-212ENST00000576708 DNAH3Q8TD57 4116 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 IGKV1-9A0A0C4DH69 117 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 LOC107986453A0A1B0GWG9 222 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 hCG_1809904A0A1W2PP81 198 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 A0A1W2PPE2 198 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 A0A1W2PR64 198 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 A0A1W2PRV1 198 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 FAM172BPA6NC97 362 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 METTL15A6NJ78 407 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 SH2D7A6NKC9 451 aaPredicted RBP4.98□□□□□ -1.61
NUP88-212ENST00000576708 L7N2F9 121 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 RAB27BO00194 218 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 SIRPB1O00241 398 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 UBE2CO00762 179 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 SYT7O43581 403 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 HAND1O96004 215 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 RPSAP08865 295 aaKnown RBP4.98□□□□□ -1.61
NUP88-212ENST00000576708 BCL3P20749 454 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 GABRR1P24046 479 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 POU3F4P49335 361 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 FUT6P51993 359 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 ACTR3P61158 418 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 ACTA2P62736 377 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 ACTG2P63267 376 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 ACTC1P68032 377 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 ACTA1P68133 377 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 ZNF85Q03923 595 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 SLC34A1Q06495 639 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 GRK1Q15835 563 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 ATP6AP1Q15904 470 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 SMUG1Q53HV7 270 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 FAM209BQ5JX69 171 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 KDM4DQ6B0I6 523 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 Q8N2B8 174 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 OR4S1Q8NGB4 309 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 OR11H6Q8NGC7 330 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 OR13D1Q8NGV5 346 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 WIPF2Q8TF74 440 aaPredicted RBP4.98□□□□□ -1.61
NUP88-212ENST00000576708 DNAJC9Q8WXX5 260 aa4.98□□□□□ -1.61
NUP88-212ENST00000576708 EMG1Q92979 244 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms