RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SOX15O60248 233 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 FAM3BP58499 235 aaPredicted RBP11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 AARDQ4LEZ3 155 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 Q6ZN92 141 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 C16orf82Q7Z2V1 217 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 OR1L3Q8NH93 324 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 MRPL30Q8TCC3 161 aaKnown RBP11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 LRRC3BQ96PB8 259 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 TAAR6Q96RI8 345 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 TBX15Q96SF7 602 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 PAM16Q9Y3D7 125 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 A0A0G2JMZ2 1700 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 LRRC37A2A6NM11 1700 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 LTBP4Q8N2S1 1624 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 SLC31A2O15432 143 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 GABRG2P18507 467 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 TMEM50BP56557 158 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 OR8G1Q15617 311 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 LYSMD4Q5XG99 296 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 OR11L1Q8NGX0 322 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 DYRK2Q92630 601 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 GALMQ96C23 342 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 BET1LQ9NYM9 111 aa11.51□□□□□ -0.57
PCDHGB3-201ENST00000576222 C11orf94C9JXX5 98 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 RRP8O43159 456 aaKnown RBP11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 TRAF3IP2O43734 574 aaPredicted RBP11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 OR10J4P0C629 311 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 ARR3P36575 388 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 KMT5CQ86Y97 462 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 OR1P1Q8NH06 330 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 APOBEC3DQ96AK3 386 aaPredicted RBP11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 SH3BGRL3Q9H299 93 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 C12orf49Q9H741 205 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 LMO7DNF2Z398 122 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 CBR3O75828 277 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 HRASP01112 189 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 IGHEP01854 428 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 PATE4P0C8F1 98 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 PNLIPP16233 465 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 TMEM211Q6ICI0 200 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 CTHRC1Q96CG8 243 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 SLC7A10Q9NS82 523 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 CRYM-AS1A6NIL9 109 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 DSCR4P56555 118 aaPredicted RBP11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 OR5AU1Q8NGC0 362 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 FGF16O43320 207 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 SMIM10L1P0DMW3 83 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 COL9A1P20849 921 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 PIGYQ3MUY2 71 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 ZNF343Q6P1L6 599 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 LRP11Q86VZ4 500 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 OR10G8Q8NGN5 311 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 KCNE4Q8WWG9 221 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 SMIM10Q96HG1 83 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 GNRHR2Q96P88 292 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 ANGPTL4Q9BY76 406 aa11.5□□□□□ -0.57
PCDHGB3-201ENST00000576222 CNN1P51911 297 aaKnown RBP11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 OR8B8Q15620 311 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 TEX30Q5JUR7 227 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 ZNF596Q8TC21 504 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 PLA2G2FQ9BZM2 168 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 ZNF665Q9H7R5 613 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 PLXNB2O15031 1838 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 TMEM14DPA8MWL7 114 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 FCGR3AP08637 254 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 CEACAM6P40199 344 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 CXCL12P48061 93 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 GNG3P63215 75 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 PRDX4Q13162 271 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 PLGLAQ15195 96 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 TRIM61Q5EBN2 209 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 DDA1Q9BW61 102 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 ESRP2Q9H6T0 727 aaKnown RBP11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 TUBA4BQ9H853 241 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 PAPPA2Q9BXP8 1791 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 PAGE4O60829 102 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 IFI6P09912 130 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 RNF224P0DH78 156 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 GLB1P16278 677 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 HOXA5P20719 270 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 MOB1BQ7L9L4 216 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 SMIM15Q7Z3B0 74 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 HLA-CQ95604 372 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 ELOVL1Q9BW60 279 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 G6PC2Q9NQR9 355 aa11.49□□□□□ -0.57
PCDHGB3-201ENST00000576222 A0A1W2PR80 420 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 SPINT1O43278 529 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 MYPOPQ86VE0 399 aaPredicted RBP11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 RPP25Q9BUL9 199 aaKnown RBP11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 TPPP3Q9BW30 176 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 AICDAQ9GZX7 198 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 CHEK1O14757 476 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 GLIPR1P48060 266 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 SUCLG1P53597 346 aaKnown RBP11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 FZD5Q13467 585 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 COL19A1Q14993 1142 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 SLC35E1Q96K37 410 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 NUDT16L1Q9BRJ7 211 aaKnown RBP11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 TUBD1Q9UJT1 453 aa11.48□□□□□ -0.57
PCDHGB3-201ENST00000576222 SSUH2Q9Y2M2 353 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms