RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 RAB11BQ15907 218 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 KRTAP21-3Q3LHN1 58 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 RUSC1-AS1Q66K80 236 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 USP43Q70EL4 1123 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 BCL6BQ8N143 479 aaPredicted RBP12.47□□□□□ -0.41
LITAF-217ENST00000575426 KCNG3Q8TAE7 436 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 FAM46BQ96A09 425 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 DPCDQ9BVM2 203 aaPredicted RBP12.47□□□□□ -0.41
LITAF-217ENST00000575426 GAL3ST2Q9H3Q3 398 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 ZNF696Q9H7X3 374 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 OR6C3Q9NZP0 311 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 ODAMA1E959 279 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 RNASEK-C17orf49H0YIS7 233 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 BPNT1O95861 308 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 RBP4P02753 201 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 CD37P11049 281 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 ARSBP15848 533 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 CD36P16671 472 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 RAB3BP20337 219 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 FGF9P31371 208 aaPredicted RBP12.46□□□□□ -0.41
LITAF-217ENST00000575426 UBE2E1P51965 193 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 KLRD1Q13241 179 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 RBM39Q14498 530 aaKnown RBP12.46□□□□□ -0.41
LITAF-217ENST00000575426 SIGLECL1Q8N7X8 197 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 ZNF565Q8N9K5 539 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 TMEM104Q8NE00 496 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 CORO2AQ92828 525 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 C1orf147Q96MC9 270 aaPredicted RBP12.46□□□□□ -0.41
LITAF-217ENST00000575426 TMEM59Q9BXS4 323 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 TXNL4BQ9NX01 149 aaKnown RBP12.46□□□□□ -0.41
LITAF-217ENST00000575426 TAS2R3Q9NYW6 316 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 FAM96BQ9Y3D0 163 aa12.46□□□□□ -0.41
LITAF-217ENST00000575426 MEIKINA0A087WXM9 373 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 A0A1W2PRD5 423 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 A0A1W2PRF3 423 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 A0A1W2PRM7 423 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 VSIG8P0DPA2 414 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 FUT3P21217 361 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 DLX1P56177 255 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 HILS1P60008 231 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 PRB3Q04118 309 aaPredicted RBP12.45□□□□□ -0.42
LITAF-217ENST00000575426 P2RY14Q15391 338 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 OR13D1Q8NGV5 346 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 TNFRSF14Q92956 283 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 COQ2Q96H96 371 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 Q96M66 194 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 GFI1Q99684 422 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 CHCHD6Q9BRQ6 235 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 OR51E2Q9H255 320 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 NCOR1P1Q9H4R4 102 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 STEAP1Q9UHE8 339 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 PEX16Q9Y5Y5 336 aa12.45□□□□□ -0.42
LITAF-217ENST00000575426 ZNF729A6NN14 1252 aaPredicted RBP12.44□□□□□ -0.42
LITAF-217ENST00000575426 TRIM77I1YAP6 450 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 NPFFO15130 113 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 IGHV1-8P0DP01 117 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 DLX6P56179 175 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 LGALS4P56470 323 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 BAMBIQ13145 260 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 DEFB112Q30KQ8 113 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 TIMM50Q3ZCQ8 353 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 HES5Q5TA89 166 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 SLC35E4Q6ICL7 350 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 OR52W1Q6IF63 320 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 OR10K2Q6IF99 312 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 RAB12Q6IQ22 244 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 BRICD5Q6PL45 260 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 ZNF782Q6ZMW2 699 aaPredicted RBP12.44□□□□□ -0.42
LITAF-217ENST00000575426 OR2W3Q7Z3T1 314 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 TPRA1Q86W33 373 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 C11orf42Q8N5U0 333 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 OR51D1Q8NGF3 324 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 TMEM158Q8WZ71 300 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 KCTD7Q96MP8 289 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 NEDD4LQ96PU5 975 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 URM1Q9BTM9 101 aaKnown RBP12.44□□□□□ -0.42
LITAF-217ENST00000575426 KIF25Q9UIL4 384 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 SOX21Q9Y651 276 aaPredicted RBP12.44□□□□□ -0.42
LITAF-217ENST00000575426 SVEP1Q4LDE5 3571 aa12.44□□□□□ -0.42
LITAF-217ENST00000575426 LOC100506127A0A0U1RQW1 187 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 TMEM30CPA0ZSE6 113 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 MEIOCA2RUB1 952 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 CLPXO76031 633 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 PAHP00439 452 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 GLAP06280 429 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 JUNBP17275 347 aaPredicted RBP12.43□□□□□ -0.42
LITAF-217ENST00000575426 COX7A1P24310 79 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 GADD45AP24522 165 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 GLP1RP43220 463 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 CLDN12P56749 244 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 RPS27AP62979 156 aaKnown RBP12.43□□□□□ -0.42
LITAF-217ENST00000575426 C2orf76Q3KRA6 126 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 RSBN1Q5VWQ0 802 aaPredicted RBP12.43□□□□□ -0.42
LITAF-217ENST00000575426 TCF23Q7RTU1 214 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 PNKDQ8N490 385 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 PLPPR1Q8TBJ4 325 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 SLC25A28Q96A46 364 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 FAM3DQ96BQ1 224 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 ETAA1Q9NY74 926 aa12.43□□□□□ -0.42
LITAF-217ENST00000575426 ZNF581Q9P0T4 197 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms