RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 SELEP16581 610 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 CCR7P32248 378 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 OR1D4P47884 311 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 GNG3P63215 75 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 BTN3A2P78410 334 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 MRPS11P82912 194 aaKnown RBP2.64□□□□□ -1.99
NUP88-209ENST00000574855 TWF1Q12792 350 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 ZNF239Q16600 458 aaKnown RBP2.64□□□□□ -1.99
NUP88-209ENST00000574855 NSUN5P1Q3KNT7 163 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 LIN52Q52LA3 116 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 UBE2UQ5VVX9 321 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 FAM219BQ5XKK7 198 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 OLFML2AQ68BL7 652 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 TMEM215Q68D42 235 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 OR2T5Q6IEZ7 315 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 BAIAP2L2Q6UXY1 529 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 FAM220AQ7Z4H9 259 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 SH2D6Q7Z4S9 175 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 GALNT10Q86SR1 603 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 LRRC18Q8N456 261 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 ZFP41Q8N8Y5 198 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 OR4M2Q8NGB6 313 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 OR52E4Q8NGH9 312 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 OR51G1Q8NGK1 321 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 OR2A1Q8NGT9 310 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 OR2T29Q8NH02 315 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 OR1P1Q8NH06 330 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 OR10A6Q8NH74 314 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 TNFAIP8L1Q8WVP5 186 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 PCNPQ8WW12 178 aaKnown RBP2.64□□□□□ -1.99
NUP88-209ENST00000574855 UCN3Q969E3 161 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 TMEM54Q969K7 222 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 TMBIM1Q969X1 311 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 PPCDCQ96CD2 204 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 ZHX1-C8orf76Q96EF9 292 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 ANKRD36BP1Q96IX9 119 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 PGLYRP3Q96LB9 341 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 QKIQ96PU8 341 aaKnown RBP eCLIP2.64□□□□□ -1.99
NUP88-209ENST00000574855 PFDN5Q99471 154 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 LRRC61Q9BV99 259 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 TM2D1Q9BX74 207 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 OR11A1Q9GZK7 315 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 ARV1Q9H2C2 271 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 SPNS1Q9H2V7 528 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 WDR41Q9HAD4 459 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 WFDC1Q9HC57 220 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 EXOSC4Q9NPD3 245 aaKnown RBP2.64□□□□□ -1.99
NUP88-209ENST00000574855 TMEM138Q9NPI0 162 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 TMEM9BQ9NQ34 198 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 MIEF1Q9NQG6 463 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 BIN3Q9NQY0 253 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 OR1A1Q9P1Q5 309 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 PCYOX1Q9UHG3 505 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 PRO0628Q9UI54 55 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 DKKL1Q9UK85 242 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 SLC35A3Q9Y2D2 325 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 ASB4Q9Y574 426 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 MYH4Q9Y623 1939 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 SLX4Q8IY92 1834 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 ANKRD31Q8N7Z5 1873 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 IGKV6D-21A0A0A0MT36 114 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 A0A0G2JLM5 398 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 TMEM150BA6NC51 233 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 GMNCA6NCL1 334 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 PHYHO14832 338 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 MGRN1O60291 552 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 SOX14O95416 240 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 NUDT14O95848 222 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 IGHV3-9P01782 118 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 GIPP09681 153 aaPredicted RBP2.63□□□□□ -1.99
NUP88-209ENST00000574855 ZSCAN5DPP0CG00 497 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 ESDP10768 282 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 CD37P11049 281 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 CD1DP15813 335 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 PRKACGP22612 351 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 CXCR1P25024 350 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 SLC6A1P30531 599 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 FCGR2CP31995 323 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 RPS9P46781 194 aaKnown RBP2.63□□□□□ -1.99
NUP88-209ENST00000574855 RND2P52198 227 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 APOC4P55056 127 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 SLC35A1P78382 337 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 PSG4Q00888 419 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 ZNF92Q03936 586 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 SMAGPQ0VAQ4 97 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 GINS1Q14691 196 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 TSNQ15631 228 aaKnown RBP2.63□□□□□ -1.99
NUP88-209ENST00000574855 TAB1Q15750 504 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 ECSCRQ19T08 205 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 PARP15Q460N3 678 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 ACSBG2Q5FVE4 666 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 REP15Q6BDI9 236 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 RPL13AP3Q6NVV1 102 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 ZFP1Q6P2D0 407 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 SFXN4Q6P4A7 337 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 DCUN1D2Q6PH85 259 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 RASSF6Q6ZTQ3 369 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 DEFB132Q7Z7B7 95 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 SKA3Q8IX90 412 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 EIF4E3Q8N5X7 224 aaKnown RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms