RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ETAA1Q9NY74 926 aa20.07■□□□□ 0.8
ATPAF1-213ENST00000574428 MAB21L2Q9Y586 359 aa20.07■□□□□ 0.8
ATPAF1-213ENST00000574428 PTPN13Q12923 2485 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 SULT1C2O00338 296 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 ORC5O43913 435 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 ZNF737O75373 536 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 IGHV2-70P01814 119 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 GLAP06280 429 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 OR3A1P47881 315 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 ZNF525Q8N782 197 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 PLPPR1Q8TBJ4 325 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 SDSLQ96GA7 329 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 TMEM246Q9BRR3 403 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 ZNF701Q9NV72 531 aaPredicted RBP20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 CA11O75493 328 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 GDNFP39905 211 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 MRPS15P82914 257 aaKnown RBP20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 ZNF788Q6ZQV5 615 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 GVQW1Q8N7I0 195 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 SHARPINQ9H0F6 387 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 ZNF665Q9H7R5 613 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 MTFP1Q9UDX5 166 aa20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 ZNF230Q9UIE0 474 aaPredicted RBP20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 RBMX2Q9Y388 322 aaKnown RBP20.06■□□□□ 0.8
ATPAF1-213ENST00000574428 NKX6-3A6NJ46 265 aa20.05■□□□□ 0.8
ATPAF1-213ENST00000574428 TMPRSS2O15393 492 aa20.05■□□□□ 0.8
ATPAF1-213ENST00000574428 MDH2P40926 338 aaKnown RBP20.05■□□□□ 0.8
ATPAF1-213ENST00000574428 GLCCI1Q86VQ1 547 aa20.05■□□□□ 0.8
ATPAF1-213ENST00000574428 ZNF561Q8N587 486 aa20.05■□□□□ 0.8
ATPAF1-213ENST00000574428 MYOZ1Q9NP98 299 aaPredicted RBP20.05■□□□□ 0.8
ATPAF1-213ENST00000574428 C12orf4Q9NQ89 552 aa20.05■□□□□ 0.8
ATPAF1-213ENST00000574428 RBBP9O75884 186 aa20.04■□□□□ 0.8
ATPAF1-213ENST00000574428 HNRNPCP07910 306 aaKnown RBP eCLIP20.04■□□□□ 0.8
ATPAF1-213ENST00000574428 ATP5J2P56134 94 aa20.04■□□□□ 0.8
ATPAF1-213ENST00000574428 GRK1Q15835 563 aa20.04■□□□□ 0.8
ATPAF1-213ENST00000574428 LYPD2Q6UXB3 125 aa20.04■□□□□ 0.8
ATPAF1-213ENST00000574428 TOMM5Q8N4H5 51 aa20.04■□□□□ 0.8
ATPAF1-213ENST00000574428 MAFIPQ8WZ33 124 aa20.04■□□□□ 0.8
ATPAF1-213ENST00000574428 PERPQ96FX8 193 aa20.04■□□□□ 0.8
ATPAF1-213ENST00000574428 TIMD4Q96H15 378 aa20.04■□□□□ 0.8
ATPAF1-213ENST00000574428 CHMP1AQ9HD42 196 aaPredicted RBP20.04■□□□□ 0.8
ATPAF1-213ENST00000574428 IFT46Q9NQC8 304 aa20.04■□□□□ 0.8
ATPAF1-213ENST00000574428 SPG11Q96JI7 2443 aa20.04■□□□□ 0.8
ATPAF1-213ENST00000574428 TNFRSF13BO14836 293 aaPredicted RBP20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 IL13RA1P78552 427 aa20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 KCNJ8Q15842 424 aa20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 ATPAF1Q5TC12 328 aaPredicted RBP20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 Q6ZPA2 131 aa20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 DUSP18Q8NEJ0 188 aa20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 TMEM185AQ8NFB2 350 aa20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 RAB1CQ92928 201 aa20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 FAM240BA0A1B0GVZ2 78 aa20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 K7N7A8 449 aa20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 SIGLEC5O15389 551 aa20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 ADAM20O43506 726 aa20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 TMEM33P57088 247 aa20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 SHEQ5VZ18 495 aa20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 SNX22Q96L94 193 aa20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 OCSTAMPQ9BR26 566 aa20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 ST6GALNAC5Q9BVH7 336 aa20.03■□□□□ 0.8
ATPAF1-213ENST00000574428 BOLA2-SMG1P6H3BVE0 249 aa20.02■□□□□ 0.8
ATPAF1-213ENST00000574428 FSTL3O95633 263 aa20.02■□□□□ 0.8
ATPAF1-213ENST00000574428 NAPSAO96009 420 aa20.02■□□□□ 0.8
ATPAF1-213ENST00000574428 TK1P04183 234 aa20.02■□□□□ 0.8
ATPAF1-213ENST00000574428 FCGR3AP08637 254 aa20.02■□□□□ 0.8
ATPAF1-213ENST00000574428 BTCP35070 178 aa20.02■□□□□ 0.8
ATPAF1-213ENST00000574428 AESQ08117 197 aa20.02■□□□□ 0.8
ATPAF1-213ENST00000574428 EDDM3AQ14507 147 aa20.02■□□□□ 0.8
ATPAF1-213ENST00000574428 ZNF497Q6ZNH5 498 aa20.02■□□□□ 0.8
ATPAF1-213ENST00000574428 COQ2Q96H96 371 aa20.02■□□□□ 0.8
ATPAF1-213ENST00000574428 DNTTIP1Q9H147 329 aa20.02■□□□□ 0.8
ATPAF1-213ENST00000574428 ABCA12Q86UK0 2595 aa20.01■□□□□ 0.79
ATPAF1-213ENST00000574428 ACTBP60709 375 aa20.01■□□□□ 0.79
ATPAF1-213ENST00000574428 ACTG1P63261 375 aa20.01■□□□□ 0.79
ATPAF1-213ENST00000574428 KLF9Q13886 244 aaPredicted RBP20.01■□□□□ 0.79
ATPAF1-213ENST00000574428 OR52W1Q6IF63 320 aa20.01■□□□□ 0.79
ATPAF1-213ENST00000574428 PLET1Q6UQ28 207 aa20.01■□□□□ 0.79
ATPAF1-213ENST00000574428 FGFRL1Q8N441 504 aa20.01■□□□□ 0.79
ATPAF1-213ENST00000574428 MRPL30Q8TCC3 161 aaKnown RBP20.01■□□□□ 0.79
ATPAF1-213ENST00000574428 CTSZQ9UBR2 303 aa20.01■□□□□ 0.79
ATPAF1-213ENST00000574428 RCVRNP35243 200 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 CBX5P45973 191 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 GPR6P46095 362 aaPredicted RBP20■□□□□ 0.79
ATPAF1-213ENST00000574428 CD300CQ08708 224 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 RSBN1Q5VWQ0 802 aaPredicted RBP20■□□□□ 0.79
ATPAF1-213ENST00000574428 SLC36A1Q7Z2H8 476 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 MUC20Q8N307 709 aaPredicted RBP20■□□□□ 0.79
ATPAF1-213ENST00000574428 TPRX1Q8N7U7 411 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 OR4K15Q8NH41 348 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 PPP1R35Q8TAP8 253 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 SNAPC3Q92966 411 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 MED30Q96HR3 178 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 BARX1Q9HBU1 254 aaPredicted RBP20■□□□□ 0.79
ATPAF1-213ENST00000574428 CEACAM18A8MTB9 384 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 NDUFA2O43678 99 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 CSN2P05814 226 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 PAX1P15863 534 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 DTYMKP23919 212 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 SLC6A1P30531 599 aa20■□□□□ 0.79
ATPAF1-213ENST00000574428 SSBP1Q04837 148 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms