RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 CDX1P47902 265 aaPredicted RBP9.29□□□□□ -0.92
CCDC40-207ENST00000572253 CCL20P78556 96 aa9.29□□□□□ -0.92
CCDC40-207ENST00000572253 DLK1P80370 383 aa9.29□□□□□ -0.92
CCDC40-207ENST00000572253 RPS19BP1Q86WX3 136 aaKnown RBP9.29□□□□□ -0.92
CCDC40-207ENST00000572253 KCNE4Q8WWG9 221 aa9.29□□□□□ -0.92
CCDC40-207ENST00000572253 A0A1W2PQM1 296 aa9.29□□□□□ -0.92
CCDC40-207ENST00000572253 CXorf65A6NEN9 183 aa9.29□□□□□ -0.92
CCDC40-207ENST00000572253 GATCO43716 136 aaKnown RBP9.29□□□□□ -0.92
CCDC40-207ENST00000572253 PSG4Q00888 419 aa9.29□□□□□ -0.92
CCDC40-207ENST00000572253 ZNF92Q03936 586 aa9.29□□□□□ -0.92
CCDC40-207ENST00000572253 IL24Q13007 206 aa9.29□□□□□ -0.92
CCDC40-207ENST00000572253 ZNF506Q5JVG8 444 aa9.29□□□□□ -0.92
CCDC40-207ENST00000572253 PHF7Q9BWX1 381 aaPredicted RBP9.29□□□□□ -0.92
CCDC40-207ENST00000572253 P4HTMQ9NXG6 502 aa9.29□□□□□ -0.92
CCDC40-207ENST00000572253 DMRT1Q9Y5R6 373 aa9.29□□□□□ -0.92
CCDC40-207ENST00000572253 LOC102723996A0A087X1L8 192 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 NKX6-1P78426 367 aaPredicted RBP9.28□□□□□ -0.92
CCDC40-207ENST00000572253 CEACAM16Q2WEN9 425 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 CXorf66Q5JRM2 361 aaPredicted RBP9.28□□□□□ -0.92
CCDC40-207ENST00000572253 SPSB3Q6PJ21 355 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 LINC00469Q8N7U9 141 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 GGACTQ9BVM4 153 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 IGHV1-45A0A0A0MS14 117 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 F10P00742 488 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 P04436 131 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 NOVA1P51513 510 aaKnown RBP9.28□□□□□ -0.92
CCDC40-207ENST00000572253 OR8G1Q15617 311 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 KHDC3LQ587J8 217 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 GAPTQ8N292 157 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 M1APQ8TC57 530 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 PFDN5Q99471 154 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 ATP5SQ99766 215 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 ZNF727A8MUV8 499 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 H0YL77 283 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 YIF1AO95070 293 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 RPS18P62269 152 aaKnown RBP9.28□□□□□ -0.92
CCDC40-207ENST00000572253 P4HA3Q7Z4N8 544 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 SLC35E3Q7Z769 313 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 CYB561D1Q8N8Q1 229 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 SCGB1C1Q8TD33 95 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 NAT6Q93015 286 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 ABHD14AQ9BUJ0 271 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 WNT5BQ9H1J7 359 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 OPA3Q9H6K4 179 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 URGCP-MRPS24S4R325 110 aa9.28□□□□□ -0.92
CCDC40-207ENST00000572253 B4DEV8 164 aa9.27□□□□□ -0.92
CCDC40-207ENST00000572253 SEC14L6B5MCN3 397 aa9.27□□□□□ -0.92
CCDC40-207ENST00000572253 HSD17B6O14756 317 aa9.27□□□□□ -0.92
CCDC40-207ENST00000572253 PPP1R2P9O14990 202 aa9.27□□□□□ -0.92
CCDC40-207ENST00000572253 IGHV2-70P01814 119 aa9.27□□□□□ -0.92
CCDC40-207ENST00000572253 EPHA8P29322 1005 aaPredicted RBP9.27□□□□□ -0.92
CCDC40-207ENST00000572253 SRD5A2P31213 254 aa9.27□□□□□ -0.92
CCDC40-207ENST00000572253 YRDCQ86U90 279 aaKnown RBP9.27□□□□□ -0.92
CCDC40-207ENST00000572253 C11orf1Q9H5F2 150 aa9.27□□□□□ -0.92
CCDC40-207ENST00000572253 CCDC163A0A0D9SF12 145 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 PROB1E7EW31 1015 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 TGOLN2O43493 480 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 ICAM4Q14773 271 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 Q6ZS49 121 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 BATF2Q8N1L9 274 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 SPEM1Q8N4L4 309 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 AKIRIN1Q9H9L7 192 aaPredicted RBP9.27□□□□□ -0.93
CCDC40-207ENST00000572253 OCIAD1Q9NX40 245 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 ZNF587BE7ETH6 402 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 CHST1O43916 411 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 CXCL13O43927 109 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 UCP1P25874 307 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 TAS2R30P59541 319 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 HLA-DRB3P79483 266 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 ID3Q02535 119 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 SRSF7Q16629 238 aaKnown RBP eCLIP9.27□□□□□ -0.93
CCDC40-207ENST00000572253 TMEM171Q8WVE6 324 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 IL22RA2Q969J5 263 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 SGCZQ96LD1 299 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 IMMP1LQ96LU5 166 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 Q9N2K0 584 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 DOK5Q9P104 306 aa9.27□□□□□ -0.93
CCDC40-207ENST00000572253 TRAPPC2LH3BP13 241 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 SLC33A1O00400 549 aaPredicted RBP9.26□□□□□ -0.93
CCDC40-207ENST00000572253 PPIHO43447 177 aaKnown RBP9.26□□□□□ -0.93
CCDC40-207ENST00000572253 SERPINE2P07093 398 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 CEACAM1P13688 526 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 EPHA1P21709 976 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 RUNX1Q01196 453 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 ZNF154Q13106 437 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 IL11RAQ14626 422 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 RIPPLY2Q5TAB7 128 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 YPEL4Q96NS1 127 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 HIST1H2AAQ96QV6 131 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 ZNF576Q9H609 170 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 GLRX2Q9NS18 164 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 TCFL5Q9UL49 500 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 YKT6O15498 198 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 CYB5BO43169 146 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 OR2B11Q5JQS5 317 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 ZNF818PQ6ZRF7 136 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 THNSL2Q86YJ6 484 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 CALHM1Q8IU99 346 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 MKXQ8IYA7 352 aa9.26□□□□□ -0.93
CCDC40-207ENST00000572253 C1orf87Q8N0U7 546 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms