RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 A0A1W2PP11 408 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 PTGES3LE9PB15 166 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 CSTBP04080 98 aaKnown RBP14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 IGFBP3P17936 291 aaPredicted RBP14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 WNT4P56705 351 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 TAS2R43P59537 309 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 IL13RA2Q14627 380 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 UTF1Q5T230 341 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 MINOS1Q5TGZ0 78 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 HEPN1Q6WQI6 88 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 OSR2Q8N2R0 312 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 JAGN1Q8N5M9 183 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 OR4D6Q8NGJ1 314 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 OR51T1Q8NGJ9 327 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 OR4P4Q8NGL7 312 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 CORO2AQ92828 525 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 RAB18Q9NP72 206 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 TCF19Q9Y242 345 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 ST3GAL6Q9Y274 331 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 ERGIC3Q9Y282 383 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 MINOS1-NBL1R4GNA1 71 aa14.35□□□□□ -0.11
CTDNEP1-207ENST00000572043 TRAV39A0A0B4J263 110 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 VGLL3A8MV65 326 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 F2RL2O00254 374 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 OR7C1O76099 320 aaPredicted RBP14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 MAS1P04201 325 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 NFYBP25208 207 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 HTR1DP28221 377 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 LTC4SQ16873 150 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 C17orf58Q2M2W7 97 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 SLC22A6Q4U2R8 563 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 OR52W1Q6IF63 320 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 ASCL4Q6XD76 172 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 NANOGP1Q8N7R0 232 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 OR13A1Q8NGR1 328 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 PLPPR1Q8TBJ4 325 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 SGCDQ92629 289 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 MUL1Q969V5 352 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 NPFFR1Q9GZQ6 430 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 ZNF286AQ9HBT8 521 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 FKBP14Q9NWM8 211 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 OR6C3Q9NZP0 311 aa14.34□□□□□ -0.11
CTDNEP1-207ENST00000572043 TRBV5-7A0A0A0MS05 114 aa14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 MEGF11A6BM72 1044 aa14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 A6NDX4 124 aa14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 TOR1AO14656 332 aa14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 GEMIN2O14893 280 aaKnown RBP14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 IGHV3-7P01780 117 aa14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 CD24P25063 80 aa14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 RBM11P57052 281 aaKnown RBP14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 RBM39Q14498 530 aaKnown RBP14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 HABP2Q14520 560 aaPredicted RBP14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 C6orf141Q5SZD1 244 aa14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 LIAT1Q6ZQX7 453 aa14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 C11orf44Q8N8P7 122 aa14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 SUMF2Q8NBJ7 301 aa14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 OR2T6Q8NHC8 308 aa14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 MRGPRDQ8TDS7 321 aa14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 DPCDQ9BVM2 203 aaPredicted RBP14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 BARHL1Q9BZE3 327 aa14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 FBLN5Q9UBX5 448 aa14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 FOXJ3Q9UPW0 622 aa14.33□□□□□ -0.12
CTDNEP1-207ENST00000572043 ZNF729A6NN14 1252 aaPredicted RBP14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 M0QZ24 198 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 TIMM23O14925 209 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 CDK1P06493 297 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 VSIG10L2P0DP72 767 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 FSTP19883 344 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 INSL4Q14641 139 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 ATAD3CQ5T2N8 411 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 RSBN1Q5VWQ0 802 aaPredicted RBP14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 RTN4RL2Q86UN3 420 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 Q8NFD4 153 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 RFESDQ8TAC1 157 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 ZNF596Q8TC21 504 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 LEAP2Q969E1 77 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 DERL3Q96Q80 235 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 CDCA4Q9BXL8 241 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 CALYQ9NYX4 217 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 IL36GQ9NZH8 169 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 DPM3Q9P2X0 92 aa14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 MRPS28Q9Y2Q9 187 aaKnown RBP14.32□□□□□ -0.12
CTDNEP1-207ENST00000572043 KBTBD11-OT1A0A1B0GTJ5 212 aa14.31□□□□□ -0.12
CTDNEP1-207ENST00000572043 PIN1P1O15428 100 aa14.31□□□□□ -0.12
CTDNEP1-207ENST00000572043 GPX5O75715 221 aa14.31□□□□□ -0.12
CTDNEP1-207ENST00000572043 KIR2DS4P43632 304 aa14.31□□□□□ -0.12
CTDNEP1-207ENST00000572043 EFNB2P52799 333 aa14.31□□□□□ -0.12
CTDNEP1-207ENST00000572043 GLIPR1L1Q6UWM5 242 aa14.31□□□□□ -0.12
CTDNEP1-207ENST00000572043 KLHDC1Q8N7A1 406 aa14.31□□□□□ -0.12
CTDNEP1-207ENST00000572043 ZNF565Q8N9K5 539 aa14.31□□□□□ -0.12
CTDNEP1-207ENST00000572043 NEK7Q8TDX7 302 aa14.31□□□□□ -0.12
CTDNEP1-207ENST00000572043 KIRREL1Q96J84 757 aa14.31□□□□□ -0.12
CTDNEP1-207ENST00000572043 OR5M11Q96RB7 305 aa14.31□□□□□ -0.12
CTDNEP1-207ENST00000572043 RANBP3Q9H6Z4 567 aaPredicted RBP14.31□□□□□ -0.12
CTDNEP1-207ENST00000572043 PAK1IP1Q9NWT1 392 aaPredicted RBP14.31□□□□□ -0.12
CTDNEP1-207ENST00000572043 SCN3BQ9NY72 215 aa14.31□□□□□ -0.12
CTDNEP1-207ENST00000572043 PITPNC1Q9UKF7 332 aa14.31□□□□□ -0.12
CTDNEP1-207ENST00000572043 GTF2F2P13984 249 aa14.3□□□□□ -0.12
CTDNEP1-207ENST00000572043 SSTR5P35346 364 aa14.3□□□□□ -0.12
CTDNEP1-207ENST00000572043 BDH1Q02338 343 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms