RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 GEMIN2O14893 280 aaKnown RBP10.94□□□□□ -0.66
CCDC40-205ENST00000571028 SLC22A1O15245 554 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 ENSAO43768 121 aaKnown RBP10.94□□□□□ -0.66
CCDC40-205ENST00000571028 PPIAL4GP0DN37 164 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 VSIG8P0DPA2 414 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 ARSBP15848 533 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 PSMD7P51665 324 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 ARF6P62330 175 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 ATXN7L3Q14CW9 347 aaPredicted RBP10.94□□□□□ -0.66
CCDC40-205ENST00000571028 PAN3Q58A45 887 aaKnown RBP10.94□□□□□ -0.66
CCDC40-205ENST00000571028 Q6P435 159 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 OR51T1Q8NGJ9 327 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 PPP1R35Q8TAP8 253 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 NEK7Q8TDX7 302 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 DCTN5Q9BTE1 182 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 CST11Q9H112 138 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 C19orf12Q9NSK7 152 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 STEAP1Q9UHE8 339 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 SCOCQ9UIL1 159 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 RPUSD1Q9UJJ7 312 aaKnown RBP10.94□□□□□ -0.66
CCDC40-205ENST00000571028 NBEAL2Q6ZNJ1 2754 aa10.94□□□□□ -0.66
CCDC40-205ENST00000571028 ARHGAP32A7KAX9 2087 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 IGHV3OR16-10A0A075B7F0 116 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 KIR2DS1A0A191URI9 304 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 IFITM5A6NNB3 132 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 SLC33A1O00400 549 aaPredicted RBP10.93□□□□□ -0.66
CCDC40-205ENST00000571028 ZNF737O75373 536 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 BPNT1O95861 308 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 ECDO95905 644 aaPredicted RBP10.93□□□□□ -0.66
CCDC40-205ENST00000571028 UBBP0CG47 229 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 ALDH3B2P48448 385 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 SERPINB10P48595 397 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 RAG2P55895 527 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 VBP1P61758 197 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 NCS1P62166 190 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 RPL31P62899 125 aaKnown RBP10.93□□□□□ -0.66
CCDC40-205ENST00000571028 PRB3Q04118 309 aaPredicted RBP10.93□□□□□ -0.66
CCDC40-205ENST00000571028 IL13RA2Q14627 380 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 C2orf76Q3KRA6 126 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 NKAPLQ5M9Q1 402 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 OLFML2AQ68BL7 652 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 GDPGP1Q6ZNW5 385 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 TPRA1Q86W33 373 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 NR2C2APQ86WQ0 139 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 OR8H2Q8N162 312 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 OR5D13Q8NGL4 314 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 KCNG3Q8TAE7 436 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 FAM3DQ96BQ1 224 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 PCGF1Q9BSM1 259 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 TMEM59Q9BXS4 323 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 FAM234AQ9H0X4 552 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 GHRLQ9UBU3 117 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 DAPK2Q9UIK4 370 aa10.93□□□□□ -0.66
CCDC40-205ENST00000571028 POLR3KQ9Y2Y1 108 aaPredicted RBP10.93□□□□□ -0.66
CCDC40-205ENST00000571028 TRAV24A0A0B4J272 114 aa10.92□□□□□ -0.66
CCDC40-205ENST00000571028 NOTOA8MTQ0 251 aa10.92□□□□□ -0.66
CCDC40-205ENST00000571028 RPL5P46777 297 aaKnown RBP10.92□□□□□ -0.66
CCDC40-205ENST00000571028 OR3A1P47881 315 aa10.92□□□□□ -0.66
CCDC40-205ENST00000571028 PAX2Q02962 417 aa10.92□□□□□ -0.66
CCDC40-205ENST00000571028 AESQ08117 197 aa10.92□□□□□ -0.66
CCDC40-205ENST00000571028 TUSC1Q2TAM9 212 aa10.92□□□□□ -0.66
CCDC40-205ENST00000571028 KLF17Q5JT82 389 aaPredicted RBP10.92□□□□□ -0.66
CCDC40-205ENST00000571028 IDNKQ5T6J7 187 aa10.92□□□□□ -0.66
CCDC40-205ENST00000571028 TRAPPC6BQ86SZ2 158 aa10.92□□□□□ -0.66
CCDC40-205ENST00000571028 SUMF2Q8NBJ7 301 aa10.92□□□□□ -0.66
CCDC40-205ENST00000571028 CHST4Q8NCG5 386 aa10.92□□□□□ -0.66
CCDC40-205ENST00000571028 Q8NFD4 153 aa10.92□□□□□ -0.66
CCDC40-205ENST00000571028 ZDHHC16Q969W1 377 aa10.92□□□□□ -0.66
CCDC40-205ENST00000571028 CITED1Q99966 193 aa10.92□□□□□ -0.66
CCDC40-205ENST00000571028 NICN1Q9BSH3 213 aa10.92□□□□□ -0.66
CCDC40-205ENST00000571028 DPCDQ9BVM2 203 aaPredicted RBP10.92□□□□□ -0.66
CCDC40-205ENST00000571028 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.92□□□□□ -0.66
CCDC40-205ENST00000571028 UBE2QL1A1L167 161 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 FAM181BA6NEQ2 426 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 MGST3O14880 152 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 GPR37O15354 613 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 HOXA3O43365 443 aaPredicted RBP10.91□□□□□ -0.66
CCDC40-205ENST00000571028 LIPFP07098 398 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 CD37P11049 281 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 SNRPBP14678 240 aaKnown RBP10.91□□□□□ -0.66
CCDC40-205ENST00000571028 GLIPR1P48060 266 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 DLX1P56177 255 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 PLA2G7Q13093 441 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 UNC119Q13432 240 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 KRBOX4Q5JUW0 171 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 METTL11BQ5VVY1 283 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 TMEM200BQ69YZ2 307 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 CLVS1Q8IUQ0 354 aaPredicted RBP10.91□□□□□ -0.66
CCDC40-205ENST00000571028 PDZD9Q8IXQ8 264 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 MRPS24Q96EL2 167 aaKnown RBP10.91□□□□□ -0.66
CCDC40-205ENST00000571028 CYYR1Q96J86 154 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 NEDD4LQ96PU5 975 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 LIN7BQ9HAP6 207 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 SEBOXQ9HB31 216 aaPredicted RBP10.91□□□□□ -0.66
CCDC40-205ENST00000571028 TNFRSF19Q9NS68 423 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 PEX16Q9Y5Y5 336 aa10.91□□□□□ -0.66
CCDC40-205ENST00000571028 TRAV39A0A0B4J263 110 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 TMEM272A0A1B0GTI8 110 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 TMEM14DPA8MWL7 114 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 MCRIP1C9JLW8 97 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms