RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 FAM107BQ9H098 131 aa9.22□□□□□ -0.93
GTF3C1-209ENST00000568569 PPIL3Q9H2H8 161 aaKnown RBP9.22□□□□□ -0.93
GTF3C1-209ENST00000568569 ARL8BQ9NVJ2 186 aa9.22□□□□□ -0.93
GTF3C1-209ENST00000568569 CALYQ9NYX4 217 aa9.22□□□□□ -0.93
GTF3C1-209ENST00000568569 PSG11Q9UQ72 335 aa9.22□□□□□ -0.93
GTF3C1-209ENST00000568569 IGKV1-12A0A0C4DH73 117 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 LOC107986453A0A1B0GWG9 222 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 SLC33A1O00400 549 aaPredicted RBP9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 MPZL2O60487 215 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 SNX3O60493 162 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 KDM4BO94953 1096 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 IL1AP01583 271 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 IGKV1D-12P01611 117 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 IGHG4P01861 327 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 OR8U8P0C7N1 319 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 UBCP0CG48 685 aaKnown RBP9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 GNG10P50151 68 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 CFHR3Q02985 330 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 SCN1BQ07699 218 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 EBI3Q14213 229 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 UTS2BQ765I0 119 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 SSX6Q7RTT6 188 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 BCDIN3DQ7Z5W3 292 aaKnown RBP9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 ZNF429Q86V71 674 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 IZUMO1Q8IYV9 350 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 Q8N9W7 124 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 LEAP2Q969E1 77 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 SPSB1Q96BD6 273 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 RNFT2Q96EX2 444 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 ADAT3Q96EY9 351 aaPredicted RBP9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 LRGUKQ96M69 825 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 LINC00574Q9H8X3 128 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 RHOFQ9HBH0 211 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 ISYNA1Q9NPH2 558 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 IDI2-AS1Q9NZ38 188 aa9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 H2AFY2Q9P0M6 372 aaPredicted RBP9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 NKX1-2Q9UD57 310 aaPredicted RBP9.21□□□□□ -0.94
GTF3C1-209ENST00000568569 HSD17B6O14756 317 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 DEGS1O15121 323 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 HCKP08631 526 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 OCM2P0CE71 109 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 OCMP0CE72 109 aaPredicted RBP9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 CGB3P0DN86 165 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 CGB7P0DN87 165 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 ATF1P18846 271 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 VDAC1P21796 283 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 PRKACGP22612 351 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 PSMB8P28062 276 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 C21orf33P30042 268 aaPredicted RBP9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 CRISP1P54107 249 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 MS4A2Q01362 244 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 ZNF816Q0VGE8 651 aaPredicted RBP9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 HSP90B2PQ58FF3 399 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 NXNL2Q5VZ03 156 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 Q6P435 159 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 ADAMTSL5Q6ZMM2 481 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 MOB3BQ86TA1 216 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 ADGRG5Q8IZF4 528 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 Q8N6K4 173 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 OR51T1Q8NGJ9 327 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 OR2T10Q8NGZ9 312 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 DNAJC9Q8WXX5 260 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 RFT1Q96AA3 541 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 EAF1Q96JC9 268 aaPredicted RBP9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 OPALINQ96PE5 141 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 TBX5Q99593 518 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 OSBPL10Q9BXB5 764 aa9.2□□□□□ -0.94
GTF3C1-209ENST00000568569 MEIKINA0A087WXM9 373 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 IGHV3-72A0A0B4J1Y9 119 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 IGHV1-3A0A0C4DH29 117 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 METTL15A6NJ78 407 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 HSPB6O14558 160 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 SULT1C4O75897 302 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 GAPDHP04406 335 aaKnown RBP9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 OR5H8P0DN80 308 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 ZNF20P17024 532 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 ZNF616Q08AN1 781 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 PTGES3Q15185 160 aaKnown RBP9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 LTC4SQ16873 150 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 AADACL4Q5VUY2 407 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 SLC16A12Q6ZSM3 486 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 GID4Q8IVV7 300 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 SAXO1Q8IYX7 474 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 PRSS35Q8N3Z0 413 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 OR5D18Q8NGL1 313 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 OR13A1Q8NGR1 328 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 MYOZ3Q8TDC0 251 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 ASB9Q96DX5 294 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 RASL11BQ9BPW5 248 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 NCOR1P1Q9H4R4 102 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 EDA2RQ9HAV5 297 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 ZNF446Q9NWS9 450 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 CHCHD3Q9NX63 227 aaKnown RBP9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 KIF25Q9UIL4 384 aa9.19□□□□□ -0.94
GTF3C1-209ENST00000568569 A0A1W2PQL4 384 aaPredicted RBP9.18□□□□□ -0.94
GTF3C1-209ENST00000568569 NPIPB11E5RHQ5 1161 aa9.18□□□□□ -0.94
GTF3C1-209ENST00000568569 H0YJX3 145 aa9.18□□□□□ -0.94
GTF3C1-209ENST00000568569 M0R129 80 aa9.18□□□□□ -0.94
GTF3C1-209ENST00000568569 OR2T7P0C7T2 308 aa9.18□□□□□ -0.94
GTF3C1-209ENST00000568569 GP9P14770 177 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms