RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 IL2RGP31785 369 aa13.54□□□□□ -0.24
COMMD4-215ENST00000566843 RSPO4Q2I0M5 234 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-215ENST00000566843 PIGYQ3MUY2 71 aa13.54□□□□□ -0.24
COMMD4-215ENST00000566843 CXorf66Q5JRM2 361 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-215ENST00000566843 CDCP2Q5VXM1 449 aa13.54□□□□□ -0.24
COMMD4-215ENST00000566843 OSR2Q8N2R0 312 aa13.54□□□□□ -0.24
COMMD4-215ENST00000566843 SUMF1Q8NBK3 374 aa13.54□□□□□ -0.24
COMMD4-215ENST00000566843 PLPPR1Q8TBJ4 325 aa13.54□□□□□ -0.24
COMMD4-215ENST00000566843 ZNF501Q96CX3 271 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-215ENST00000566843 CDH20Q9HBT6 801 aa13.54□□□□□ -0.24
COMMD4-215ENST00000566843 CISD1Q9NZ45 108 aaKnown RBP13.54□□□□□ -0.24
COMMD4-215ENST00000566843 PITPNC1Q9UKF7 332 aa13.54□□□□□ -0.24
COMMD4-215ENST00000566843 IGHV1OR21-1A0A087WYE8 117 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 A0A1W2PR77 199 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 C9J4A7 227 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 NDUFB7P17568 137 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 CRYGSP22914 178 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 GNRHRP30968 328 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 RUNX1Q01196 453 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 ZFP36L1Q07352 338 aaKnown RBP13.53□□□□□ -0.24
COMMD4-215ENST00000566843 IL24Q13007 206 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 NMSQ5H8A3 153 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 BRICD5Q6PL45 260 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 ZNF695Q8IW36 515 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 IL22RA1Q8N6P7 574 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 RNASEH2CQ8TDP1 164 aaKnown RBP13.53□□□□□ -0.24
COMMD4-215ENST00000566843 ATP5SQ99766 215 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 PRO1933Q9H354 126 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 METTL7AQ9H8H3 244 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 UBE2J1Q9Y385 318 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-215ENST00000566843 SMCO3A2RU48 225 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 LMO7DNF2Z398 122 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 DVL1O14640 695 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 DHHO43323 396 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 PDCD6O75340 191 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 H3F3AP84243 136 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 TMEM42Q69YG0 159 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 FADS6Q8N9I5 356 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 OR10G3Q8NGC4 313 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 MAGT1Q9H0U3 335 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 FAM86C1Q9NVL1 165 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 SHANK1Q9Y566 2161 aa13.53□□□□□ -0.24
COMMD4-215ENST00000566843 ADAM20O43506 726 aa13.52□□□□□ -0.24
COMMD4-215ENST00000566843 CST7O76096 145 aa13.52□□□□□ -0.24
COMMD4-215ENST00000566843 JOSD1Q15040 202 aaPredicted RBP13.52□□□□□ -0.24
COMMD4-215ENST00000566843 OR8G1Q15617 311 aa13.52□□□□□ -0.24
COMMD4-215ENST00000566843 TBC1D26Q86UD7 250 aa13.52□□□□□ -0.24
COMMD4-215ENST00000566843 PLXDC1Q8IUK5 500 aa13.52□□□□□ -0.24
COMMD4-215ENST00000566843 H1FOOQ8IZA3 346 aaPredicted RBP13.52□□□□□ -0.24
COMMD4-215ENST00000566843 TMEM123Q8N131 208 aa13.52□□□□□ -0.24
COMMD4-215ENST00000566843 BORCS8Q96FH0 119 aa13.52□□□□□ -0.24
COMMD4-215ENST00000566843 ATXN7O15265 892 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-215ENST00000566843 PGA5P0DJD9 388 aa13.52□□□□□ -0.25
COMMD4-215ENST00000566843 SFTPCP11686 197 aa13.52□□□□□ -0.25
COMMD4-215ENST00000566843 MALLQ13021 153 aa13.52□□□□□ -0.25
COMMD4-215ENST00000566843 Q6ZS49 121 aa13.52□□□□□ -0.25
COMMD4-215ENST00000566843 SDF2L1Q9HCN8 221 aa13.52□□□□□ -0.25
COMMD4-215ENST00000566843 PLEK2Q9NYT0 353 aa13.52□□□□□ -0.25
COMMD4-215ENST00000566843 OPN1MWP04001 364 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 OPN1MW2P0DN77 364 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 OPN1MW3P0DN78 364 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 FUT3P21217 361 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 NPBWR2P48146 333 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 PAX9P55771 341 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 OR2AE1Q8NHA4 323 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 POM121Q96HA1 1249 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 CTDSP1Q9GZU7 261 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 ST3GAL6Q9Y274 331 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 DFFBO76075 338 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 UCP1P25874 307 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 CD38P28907 300 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 FAM69BQ5VUD6 431 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 TMEM183AQ8IXX5 376 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 MBD3L1Q8WWY6 194 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 FGF21Q9NSA1 209 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 RNF115Q9Y4L5 304 aa13.51□□□□□ -0.25
COMMD4-215ENST00000566843 MUC3AQ02505 3323 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 OR2J2O76002 312 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 DKK1O94907 266 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 BCL2P10415 239 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 TCN2P20062 427 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 FGF7P21781 194 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 VDAC1P21796 283 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 RAB11AP62491 216 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 ZNF154Q13106 437 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 RAB35Q15286 201 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 FAM27BQ5VT28 67 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 ABLIM2Q6H8Q1 611 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 P4HA3Q7Z4N8 544 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 WDR5BQ86VZ2 330 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 KMT5CQ86Y97 462 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 TMEM217Q8N7C4 229 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 NOL4LQ96MY1 436 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-215ENST00000566843 ZNF385AQ96PM9 386 aaKnown RBP13.5□□□□□ -0.25
COMMD4-215ENST00000566843 MYOTQ9UBF9 498 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 TP53TG5Q9Y2B4 290 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 USP34Q70CQ2 3546 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 ADAMTS20P59510 1910 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 CHST1O43916 411 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 RBM11P57052 281 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms