RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CAMLGP49069 296 aa14.41□□□□□ -0.1
CMTM3-213ENST00000566756 DAZAP2Q15038 168 aaPredicted RBP14.41□□□□□ -0.1
CMTM3-213ENST00000566756 TSPO2Q5TGU0 170 aa14.41□□□□□ -0.1
CMTM3-213ENST00000566756 Q6ZPA2 131 aa14.41□□□□□ -0.1
CMTM3-213ENST00000566756 SLC35G3Q8N808 338 aa14.41□□□□□ -0.1
CMTM3-213ENST00000566756 BOD1Q96IK1 185 aa14.41□□□□□ -0.1
CMTM3-213ENST00000566756 AKR1E2Q96JD6 320 aa14.41□□□□□ -0.1
CMTM3-213ENST00000566756 PBDC1Q9BVG4 233 aa14.41□□□□□ -0.1
CMTM3-213ENST00000566756 FAM186AA6NE01 2351 aa14.41□□□□□ -0.1
CMTM3-213ENST00000566756 CLEC18AA5D8T8 446 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 MMP9P14780 707 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 ID4P47928 161 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 RAB5BP61020 215 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 ZNF266Q14584 549 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 RTP5Q14D33 572 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 DPPA2Q7Z7J5 298 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 CALHM1Q8IU99 346 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 CLEC18CQ8NCF0 446 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 SECTM1Q8WVN6 248 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 BSCL2Q96G97 398 aaPredicted RBP14.4□□□□□ -0.1
CMTM3-213ENST00000566756 TP53RKQ96S44 253 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 RCL1Q9Y2P8 373 aaKnown RBP14.4□□□□□ -0.1
CMTM3-213ENST00000566756 GVINP1Q7Z2Y8 2422 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 OR7C1O76099 320 aaPredicted RBP14.4□□□□□ -0.1
CMTM3-213ENST00000566756 F10P00742 488 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 CTXN2P0C2S0 81 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 GDF1P27539 372 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 FGF12P61328 243 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 MPV17LQ2QL34 196 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 WIPI1Q5MNZ9 446 aaPredicted RBP14.4□□□□□ -0.1
CMTM3-213ENST00000566756 LINC00696Q6ZRV3 163 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 MDS2Q8NDY4 140 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 OR11L1Q8NGX0 322 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 SLC39A7Q92504 469 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 REPIN1Q9BWE0 567 aaKnown RBP14.4□□□□□ -0.1
CMTM3-213ENST00000566756 COA4Q9NYJ1 87 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 DLL3Q9NYJ7 618 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 B4GALT7Q9UBV7 327 aa14.4□□□□□ -0.1
CMTM3-213ENST00000566756 FAM221AA4D161 298 aa14.39□□□□□ -0.11
CMTM3-213ENST00000566756 UMAD1C9J7I0 102 aa14.39□□□□□ -0.11
CMTM3-213ENST00000566756 NAPSAO96009 420 aa14.39□□□□□ -0.11
CMTM3-213ENST00000566756 PPT1P50897 306 aa14.39□□□□□ -0.11
CMTM3-213ENST00000566756 EWSR1Q01844 656 aaKnown RBP eCLIP14.39□□□□□ -0.11
CMTM3-213ENST00000566756 BRICD5Q6PL45 260 aa14.39□□□□□ -0.11
CMTM3-213ENST00000566756 SLC25A26Q70HW3 274 aa14.39□□□□□ -0.11
CMTM3-213ENST00000566756 OR2C3Q8N628 320 aa14.39□□□□□ -0.11
CMTM3-213ENST00000566756 GTF3AQ92664 365 aaKnown RBP14.39□□□□□ -0.11
CMTM3-213ENST00000566756 EXTL1Q92935 676 aa14.39□□□□□ -0.11
CMTM3-213ENST00000566756 ZNF703Q9H7S9 590 aaPredicted RBP14.39□□□□□ -0.11
CMTM3-213ENST00000566756 Q9N2K0 584 aa14.39□□□□□ -0.11
CMTM3-213ENST00000566756 KLF13Q9Y2Y9 288 aaPredicted RBP14.39□□□□□ -0.11
CMTM3-213ENST00000566756 ARGFXA6NJG6 315 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 ZNF587BE7ETH6 402 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 K7N7A8 449 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 PITX3O75364 302 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 TRAPPC6AO75865 159 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 MT-ND4LP03901 98 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 TK1P04183 234 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 GNRHRP30968 328 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 ZNF616Q08AN1 781 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 ATP1A1-AS1Q5TC04 95 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 ASCL5Q7RTU5 278 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.38□□□□□ -0.11
CMTM3-213ENST00000566756 SLC25A31Q9H0C2 315 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 ESRP2Q9H6T0 727 aaKnown RBP14.38□□□□□ -0.11
CMTM3-213ENST00000566756 PLA2G3Q9NZ20 509 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 KIR2DS1A0A191URI9 304 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 NME2P1O60361 137 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 ZNF205O95201 554 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 SP1P08047 785 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 PTAFRP25105 342 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 KIR2DS4P43632 304 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 S100A12P80511 92 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 NHLH2Q02577 135 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 KIR2DS1Q14954 304 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 RHEBQ15382 184 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 LINC00596Q86U02 117 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 CPEB3Q8NE35 698 aaKnown RBP14.38□□□□□ -0.11
CMTM3-213ENST00000566756 IL22RA2Q969J5 263 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 RIMS4Q9H426 269 aaPredicted RBP14.38□□□□□ -0.11
CMTM3-213ENST00000566756 OPA3Q9H6K4 179 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 PLEKHF2Q9H8W4 249 aa14.38□□□□□ -0.11
CMTM3-213ENST00000566756 NOSIPQ9Y314 301 aaKnown RBP14.38□□□□□ -0.11
CMTM3-213ENST00000566756 BTBD17A6NE02 478 aa14.37□□□□□ -0.11
CMTM3-213ENST00000566756 MRPL33O75394 65 aaKnown RBP14.37□□□□□ -0.11
CMTM3-213ENST00000566756 TUSC2O75896 110 aa14.37□□□□□ -0.11
CMTM3-213ENST00000566756 PRH1P02810 166 aa14.37□□□□□ -0.11
CMTM3-213ENST00000566756 NKX2-1P43699 371 aaPredicted RBP14.37□□□□□ -0.11
CMTM3-213ENST00000566756 NPBWR2P48146 333 aa14.37□□□□□ -0.11
CMTM3-213ENST00000566756 AKR1D1P51857 326 aa14.37□□□□□ -0.11
CMTM3-213ENST00000566756 PRSS12P56730 875 aa14.37□□□□□ -0.11
CMTM3-213ENST00000566756 VASH2Q86V25 355 aa14.37□□□□□ -0.11
CMTM3-213ENST00000566756 ABHD3Q8WU67 409 aa14.37□□□□□ -0.11
CMTM3-213ENST00000566756 SFT2D1Q8WV19 159 aa14.37□□□□□ -0.11
CMTM3-213ENST00000566756 USB1Q9BQ65 265 aaKnown RBP14.37□□□□□ -0.11
CMTM3-213ENST00000566756 SLC35B3Q9H1N7 401 aa14.37□□□□□ -0.11
CMTM3-213ENST00000566756 C1orf196B1AJZ1 125 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 KLRC4-KLRK1H3BQV0 150 aa14.36□□□□□ -0.11
CMTM3-213ENST00000566756 HOXB1P14653 301 aaPredicted RBP14.36□□□□□ -0.11
CMTM3-213ENST00000566756 UCP1P25874 307 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms