RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	POU3F4	P49335	361 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	RBP2	P50120	134 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	RAB13	P51153	203 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	FUT6	P51993	359 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	RAP2B	P61225	183 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	RPL15	P61313	204 aa	Known RBP	5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	ACTC1	P68032	377 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	ACTA1	P68133	377 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	ACSM1	Q08AH1	577 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	PDZK1IP1	Q13113	114 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	LY6E	Q16553	131 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	C17orf58	Q2M2W7	97 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	MIDN	Q504T8	468 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	PLA1A	Q53H76	456 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	MEDAG	Q5VYS4	303 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	SLC35E4	Q6ICL7	350 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376		Q6ZPA2	131 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	CCDC121	Q6ZUS5	278 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	ASCC1	Q8N9N2	400 aa	Known RBP	5.18	□□□□□ -1.58
TCF4-233	ENST00000566376		Q8NFD4	153 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	OR11H6	Q8NGC7	330 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	SGMS2	Q8NHU3	365 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	PLPPR1	Q8TBJ4	325 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	PP6455	Q8WZ26	134 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	RFK	Q969G6	155 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	C10orf35	Q96D05	121 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	BORCS8	Q96FH0	119 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	SSX3	Q99909	188 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	C9orf16	Q9BUW7	83 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	TEX12	Q9BXU0	123 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	PPA2	Q9H2U2	334 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	PLEKHA1	Q9HB21	404 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	ZNF286A	Q9HBT8	521 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	IMPAD1	Q9NX62	359 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	TAS2R4	Q9NYW5	299 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	HHLA2	Q9UM44	414 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	FOXJ3	Q9UPW0	622 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	POLDIP2	Q9Y2S7	368 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	SACS	Q9NZJ4	4579 aa		5.18	□□□□□ -1.58
TCF4-233	ENST00000566376	TENM3	Q9P273	2699 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	RYR3	Q15413	4870 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	TRAV8-7	A0A075B6U6	113 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	IGHV2-26	A0A0B4J1V2	119 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	TRAV24	A0A0B4J272	114 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	TRBV5-5	A0A0J9YX44	114 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	KRTAP23-1	A1A580	65 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	SIRPB1	O00241	398 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	SLC1A7	O00341	560 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	CASQ2	O14958	399 aa	Predicted RBP	5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	PIN1P1	O15428	100 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	OGG1	O15527	345 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	SULT1B1	O43704	296 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	GATB	O75879	557 aa	Known RBP	5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	RBP4	P02753	201 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	ZNF728	P0DKX0	622 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	PRKACA	P17612	351 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	IGFBP3	P17936	291 aa	Predicted RBP	5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	OR3A4P	P47883	348 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	GLIPR1	P48060	266 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	P2RX3	P56373	397 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	RAB40B	Q12829	278 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	DIAPH2-AS1	Q14236	149 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	EDDM3A	Q14507	147 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	INSL4	Q14641	139 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	CNN3	Q15417	329 aa	Known RBP	5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	ZSCAN26	Q16670	478 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	LRRC36	Q1X8D7	754 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	LRRC75B	Q2VPJ9	315 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	PIGY	Q3MUY2	71 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	OGFRL1	Q5TC84	451 aa	Predicted RBP	5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	PRAMEF5	Q5TYX0	476 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	TMEM244	Q5VVB8	128 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	NCR3LG1	Q68D85	454 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	DMKN	Q6E0U4	476 aa	Predicted RBP	5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	ASCL4	Q6XD76	172 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	ZBTB49	Q6ZSB9	765 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	FAM220A	Q7Z4H9	259 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	C5orf24	Q7Z6I8	188 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	TMEM219	Q86XT9	240 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	FAM58A	Q8N1B3	248 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376		Q8N2B8	174 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	ZFP41	Q8N8Y5	198 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	OR10K1	Q8NGX5	313 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	OR4F5	Q8NH21	305 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	SPSB1	Q96BD6	273 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	SNX22	Q96L94	193 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	HIST1H2AA	Q96QV6	131 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	FKBP14	Q9NWM8	211 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	SMPD3	Q9NY59	655 aa	Predicted RBP	5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	NKX1-2	Q9UD57	310 aa	Predicted RBP	5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	TCF19	Q9Y242	345 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	PCDHGB5	Q9Y5G0	923 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376	LINC00312	Q9Y6C7	94 aa		5.17	□□□□□ -1.58
TCF4-233	ENST00000566376		A0A087X0M5	115 aa		5.16	□□□□□ -1.58
TCF4-233	ENST00000566376	TRBV5-7	A0A0A0MS05	114 aa		5.16	□□□□□ -1.58
TCF4-233	ENST00000566376		A0A0G2JK05	382 aa		5.16	□□□□□ -1.58
TCF4-233	ENST00000566376		A0A1B0GX30	115 aa		5.16	□□□□□ -1.58
TCF4-233	ENST00000566376	FAM90A22P	A8MWA6	464 aa		5.16	□□□□□ -1.58
TCF4-233	ENST00000566376		H0YAE9	185 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms