RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 MMP23AO75900 390 aa2.57□□□□□ -2
CHD9-218ENST00000566029 CTSEP14091 401 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ZNF415Q09FC8 603 aa2.57□□□□□ -2
CHD9-218ENST00000566029 OXLD1Q5BKU9 147 aa2.57□□□□□ -2
CHD9-218ENST00000566029 HOGA1Q86XE5 327 aa2.57□□□□□ -2
CHD9-218ENST00000566029 SIGLECL1Q8N7X8 197 aa2.57□□□□□ -2
CHD9-218ENST00000566029 GPR119Q8TDV5 335 aa2.57□□□□□ -2
CHD9-218ENST00000566029 C4orf36Q96KX1 117 aa2.57□□□□□ -2
CHD9-218ENST00000566029 C11orf1Q9H5F2 150 aa2.57□□□□□ -2
CHD9-218ENST00000566029 PPIAL4CA0A0B4J2A2 164 aa2.57□□□□□ -2
CHD9-218ENST00000566029 DLL1O00548 723 aa2.57□□□□□ -2
CHD9-218ENST00000566029 RHBDL1O75783 438 aa2.57□□□□□ -2
CHD9-218ENST00000566029 PPIAL4GP0DN37 164 aa2.57□□□□□ -2
CHD9-218ENST00000566029 SUPT4H1P63272 117 aaKnown RBP2.57□□□□□ -2
CHD9-218ENST00000566029 SNAI3Q3KNW1 292 aa2.57□□□□□ -2
CHD9-218ENST00000566029 PDLIM3Q53GG5 364 aaPredicted RBP2.57□□□□□ -2
CHD9-218ENST00000566029 C9orf50Q5SZB4 431 aa2.57□□□□□ -2
CHD9-218ENST00000566029 MDGA2Q7Z553 956 aa2.57□□□□□ -2
CHD9-218ENST00000566029 KLK6Q92876 244 aa2.57□□□□□ -2
CHD9-218ENST00000566029 MS4A8Q9BY19 250 aa2.57□□□□□ -2
CHD9-218ENST00000566029 RXFP3Q9NSD7 469 aa2.57□□□□□ -2
CHD9-218ENST00000566029 SEMA5BQ9P283 1151 aa2.57□□□□□ -2
CHD9-218ENST00000566029 TBC1D29Q9UFV1 150 aa2.57□□□□□ -2
CHD9-218ENST00000566029 CTAG2O75638 210 aa2.57□□□□□ -2
CHD9-218ENST00000566029 HLA-AP01891 365 aaKnown RBP2.57□□□□□ -2
CHD9-218ENST00000566029 FABP2P12104 132 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ARFRP1Q13795 201 aa2.57□□□□□ -2
CHD9-218ENST00000566029 SGCBQ16585 318 aa2.57□□□□□ -2
CHD9-218ENST00000566029 WBP2NLQ6ICG8 309 aa2.57□□□□□ -2
CHD9-218ENST00000566029 CLEC18BQ6UXF7 455 aa2.57□□□□□ -2
CHD9-218ENST00000566029 OR51A2Q8NGJ7 313 aa2.57□□□□□ -2
CHD9-218ENST00000566029 OR2I1PQ8NGU4 316 aa2.57□□□□□ -2
CHD9-218ENST00000566029 WFDC12Q8WWY7 111 aa2.57□□□□□ -2
CHD9-218ENST00000566029 RASL10BQ96S79 203 aa2.57□□□□□ -2
CHD9-218ENST00000566029 BET1LQ9NYM9 111 aa2.57□□□□□ -2
CHD9-218ENST00000566029 SIGLEC7Q9Y286 467 aa2.57□□□□□ -2
CHD9-218ENST00000566029 A0A1B0GTH9 108 aa2.57□□□□□ -2
CHD9-218ENST00000566029 TRGC2P03986 189 aa2.57□□□□□ -2
CHD9-218ENST00000566029 OR2T7P0C7T2 308 aa2.57□□□□□ -2
CHD9-218ENST00000566029 SLC35E2P0CK97 266 aa2.57□□□□□ -2
CHD9-218ENST00000566029 HOXB2P14652 356 aa2.57□□□□□ -2
CHD9-218ENST00000566029 OR1D2P34982 312 aa2.57□□□□□ -2
CHD9-218ENST00000566029 APOBEC1P41238 236 aaKnown RBP2.57□□□□□ -2
CHD9-218ENST00000566029 OR1K1Q8NGR3 316 aa2.57□□□□□ -2
CHD9-218ENST00000566029 SCGB1C1Q8TD33 95 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ERGIC1Q969X5 290 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ALG14Q96F25 216 aa2.57□□□□□ -2
CHD9-218ENST00000566029 RNF2Q99496 336 aa2.57□□□□□ -2
CHD9-218ENST00000566029 TXNDC17Q9BRA2 123 aa2.57□□□□□ -2
CHD9-218ENST00000566029 AURKAIP1Q9NWT8 199 aaPredicted RBP2.57□□□□□ -2
CHD9-218ENST00000566029 FLRT3Q9NZU0 649 aa2.57□□□□□ -2
CHD9-218ENST00000566029 KIAA1456Q9P272 454 aa2.57□□□□□ -2
CHD9-218ENST00000566029 YIPF1Q9Y548 306 aa2.57□□□□□ -2
CHD9-218ENST00000566029 G3V3Y1 287 aa2.57□□□□□ -2
CHD9-218ENST00000566029 POLR2HP52434 150 aaKnown RBP2.57□□□□□ -2
CHD9-218ENST00000566029 TMEM33P57088 247 aa2.57□□□□□ -2
CHD9-218ENST00000566029 LRRC75AQ8NAA5 344 aa2.57□□□□□ -2
CHD9-218ENST00000566029 Q96M85 177 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ANAPC13Q9BS18 74 aa2.57□□□□□ -2
CHD9-218ENST00000566029 KCNIP1Q9NZI2 227 aa2.57□□□□□ -2
CHD9-218ENST00000566029 MRPL27Q9P0M9 148 aaKnown RBP2.57□□□□□ -2
CHD9-218ENST00000566029 TRBV24-1A0A075B6N3 115 aa2.57□□□□□ -2
CHD9-218ENST00000566029 SH2D7A6NKC9 451 aaPredicted RBP2.57□□□□□ -2
CHD9-218ENST00000566029 C17orf105B2RV13 164 aa2.57□□□□□ -2
CHD9-218ENST00000566029 NDUFB2O95178 105 aa2.57□□□□□ -2
CHD9-218ENST00000566029 HTR1DP28221 377 aa2.57□□□□□ -2
CHD9-218ENST00000566029 CDAP32320 146 aa2.57□□□□□ -2
CHD9-218ENST00000566029 SLC35A1P78382 337 aa2.57□□□□□ -2
CHD9-218ENST00000566029 DUSP2Q05923 314 aa2.57□□□□□ -2
CHD9-218ENST00000566029 RUNX2Q13950 521 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ELOBQ15370 118 aa2.57□□□□□ -2
CHD9-218ENST00000566029 FFAR4Q5NUL3 377 aa2.57□□□□□ -2
CHD9-218ENST00000566029 MFSD12Q6NUT3 480 aa2.57□□□□□ -2
CHD9-218ENST00000566029 TPRG1Q6ZUI0 275 aa2.57□□□□□ -2
CHD9-218ENST00000566029 LINC00596Q86U02 117 aa2.57□□□□□ -2
CHD9-218ENST00000566029 GCNT2Q8N0V5 402 aa2.57□□□□□ -2
CHD9-218ENST00000566029 STPG4Q8N801 248 aa2.57□□□□□ -2
CHD9-218ENST00000566029 OR10W1Q8NGF6 305 aa2.57□□□□□ -2
CHD9-218ENST00000566029 OR2Y1Q8NGV0 311 aa2.57□□□□□ -2
CHD9-218ENST00000566029 SFRP2Q96HF1 295 aa2.57□□□□□ -2
CHD9-218ENST00000566029 TMEM242Q9NWH2 141 aa2.57□□□□□ -2
CHD9-218ENST00000566029 ZNF319Q9P2F9 582 aa2.57□□□□□ -2
CHD9-218ENST00000566029 CCL15-CCL14A0A0B4J2E2 113 aa2.56□□□□□ -2
CHD9-218ENST00000566029 GRPP07492 148 aa2.56□□□□□ -2
CHD9-218ENST00000566029 CTSAP10619 480 aa2.56□□□□□ -2
CHD9-218ENST00000566029 RAB11AP62491 216 aa2.56□□□□□ -2
CHD9-218ENST00000566029 ICAM4Q14773 271 aa2.56□□□□□ -2
CHD9-218ENST00000566029 GABRA6Q16445 453 aa2.56□□□□□ -2
CHD9-218ENST00000566029 IQCJQ1A5X6 159 aa2.56□□□□□ -2
CHD9-218ENST00000566029 TMEM176BQ3YBM2 270 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 FAM90A2PQ658T7 463 aa2.56□□□□□ -2
CHD9-218ENST00000566029 KCTD18Q6PI47 426 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 ADGRE4PQ86SQ3 457 aa2.56□□□□□ -2
CHD9-218ENST00000566029 WDR5BQ86VZ2 330 aa2.56□□□□□ -2
CHD9-218ENST00000566029 ZNF100Q8IYN0 542 aa2.56□□□□□ -2
CHD9-218ENST00000566029 H1FOOQ8IZA3 346 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 OR52L2PQ8NGH6 319 aa2.56□□□□□ -2
CHD9-218ENST00000566029 OR1L4Q8NGR5 311 aa2.56□□□□□ -2
CHD9-218ENST00000566029 TMEM18Q96B42 140 aa2.56□□□□□ -2
CHD9-218ENST00000566029 CIB3Q96Q77 187 aaPredicted RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms