RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 IGHV1-69DA0A0B4J2H0 117 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 CENPVL3A0A0U1RRI6 287 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 IFITM5A6NNB3 132 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 C17orf98A8MV24 154 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 TCF21O43680 179 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 IGHV1-69P01742 117 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 VSIG8P0DPA2 414 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 AESQ08117 197 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 TAF9Q16594 264 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 KLF17Q5JT82 389 aaPredicted RBP10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 OR52W1Q6IF63 320 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 CROCCP3Q8IVE0 287 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 Q8N7P7 452 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 SUMF2Q8NBJ7 301 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 LHX4Q969G2 390 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 SLC25A28Q96A46 364 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 Q96M66 194 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 NEDD4LQ96PU5 975 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 TMEM59Q9BXS4 323 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 PPA2Q9H2U2 334 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 RAB9BQ9NP90 201 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 RAB22AQ9UL26 194 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 ZFHX3Q15911 3703 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 JMJD1CQ15652 2540 aa10.34□□□□□ -0.75
SHCBP1-204ENST00000565887 TRAV40A0A0B4J280 105 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 ODAMA1E959 279 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 ZNF729A6NN14 1252 aaPredicted RBP10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 NOTOA8MTQ0 251 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 TMEM14DPA8MWL7 114 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 AIPO00170 330 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 MPIG6BO95866 241 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 RPS27AP62979 156 aaKnown RBP10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 QRFPP83859 136 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 C2orf76Q3KRA6 126 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 TRAPPC6BQ86SZ2 158 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 TMEM104Q8NE00 496 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 OR13D1Q8NGV5 346 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 PTX4Q96A99 478 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 FAM3DQ96BQ1 224 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 NKX3-1Q99801 234 aaPredicted RBP10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 CHCHD6Q9BRQ6 235 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 TM2D1Q9BX74 207 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 MRPS26Q9BYN8 205 aaKnown RBP10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 OR51E2Q9H255 320 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 BANF2Q9H503 90 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 RCC2Q9P258 522 aaKnown RBP10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 ZNF69Q9UC07 566 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 PEX16Q9Y5Y5 336 aa10.33□□□□□ -0.76
SHCBP1-204ENST00000565887 MEIKINA0A087WXM9 373 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 LOC100506127A0A0U1RQW1 187 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 A0A1W2PP11 408 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 TMEM30CPA0ZSE6 113 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 METTL21EPA6NDL7 271 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 POM121CA8CG34 1229 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 AIREO43918 545 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 PDCD6O75340 191 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 IGHV4-38-2P0DP08 117 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 GADD45AP24522 165 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 GLIPR1P48060 266 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 SCAND1P57086 179 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 ZNF273Q14593 569 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 TUSC1Q2TAM9 212 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 MIDNQ504T8 468 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 RAB12Q6IQ22 244 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 FAM89BQ8N5H3 189 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 C11orf42Q8N5U0 333 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 OR10A7Q8NGE5 316 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 OR51D1Q8NGF3 324 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 NEK7Q8TDX7 302 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 ZFAND2BQ8WV99 257 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 TNFRSF14Q92956 283 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 YIPF6Q96EC8 236 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 GFI1Q99684 422 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 RIMS4Q9H426 269 aaPredicted RBP10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 PRDM13Q9H4Q3 707 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 FAM96BQ9Y3D0 163 aa10.32□□□□□ -0.76
SHCBP1-204ENST00000565887 KBTBD11-OT1A0A1B0GTJ5 212 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 IGHV1-8P0DP01 117 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 CCL3L1P16619 93 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 RAB6AP20340 208 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 DLX6P56179 175 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 LGALS4P56470 323 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 ATXN7L3Q14CW9 347 aaPredicted RBP10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 ARL6IP1Q15041 203 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 P2RY14Q15391 338 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 RSBN1Q5VWQ0 802 aaPredicted RBP10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 TRAT1Q6PIZ9 186 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 HEPN1Q6WQI6 88 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 SLC16A12Q6ZSM3 486 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 ZNF554Q86TJ5 538 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 RTN4RL2Q86UN3 420 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 OR56B1Q8NGI3 324 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 ZDHHC16Q969W1 377 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 FAM46BQ96A09 425 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 COQ2Q96H96 371 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 LINC00574Q9H8X3 128 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 ZMAT3Q9HA38 289 aaKnown RBP10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 SIRT7Q9NRC8 400 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 ETAA1Q9NY74 926 aa10.31□□□□□ -0.76
SHCBP1-204ENST00000565887 KIF25Q9UIL4 384 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms