RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 TMEM144Q7Z5S9 345 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 LINC00523Q86TU6 105 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 ARHGAP18Q8N392 663 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 OR51L1Q8NGJ5 315 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 ING5Q8WYH8 240 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 ZNF75AQ96N20 296 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 STMN4Q9H169 189 aaPredicted RBP1.55□□□□□ -2.16
PALB2-203ENST00000565038 PORCNQ9H237 461 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 PRO3102Q9H379 93 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 BOLA2Q9H3K6 86 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 PRSS16Q9NQE7 514 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 TMEM38BQ9NVV0 291 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 CRCT1Q9UGL9 99 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 PDE4DIPQ5VU43 2346 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 ZNF831Q5JPB2 1677 aa1.55□□□□□ -2.16
PALB2-203ENST00000565038 ADAMTSL1Q8N6G6 1762 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 DMDP11532 3685 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 BRCA1P38398 1863 aaKnown RBP1.54□□□□□ -2.16
PALB2-203ENST00000565038 SCN9AQ15858 1988 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 COL6A3P12111 3177 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 PLXNB1O43157 2135 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 SVILO95425 2214 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 SLC22A20A6NK97 555 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 H3BN98 237 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 TRDMT1O14717 391 aaKnown RBP1.54□□□□□ -2.16
PALB2-203ENST00000565038 CIAO1O76071 339 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 CSTAP01040 98 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 GFAPP14136 432 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 HOXB8P17481 243 aaPredicted RBP1.54□□□□□ -2.16
PALB2-203ENST00000565038 FUSP35637 526 aaKnown RBP eCLIP1.54□□□□□ -2.16
PALB2-203ENST00000565038 ARL2P36404 184 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 CFHR2P36980 270 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 MTPNP58546 118 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 RPL18AQ02543 176 aaKnown RBP1.54□□□□□ -2.16
PALB2-203ENST00000565038 LRRC26Q2I0M4 334 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 KRTAP13-4Q3LI77 160 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 MRPL2Q5T653 305 aaKnown RBP1.54□□□□□ -2.16
PALB2-203ENST00000565038 FKBP1CQ5VVH2 108 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 DAW1Q8N136 415 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 EIF4E3Q8N5X7 224 aaKnown RBP1.54□□□□□ -2.16
PALB2-203ENST00000565038 ASCC1Q8N9N2 400 aaKnown RBP1.54□□□□□ -2.16
PALB2-203ENST00000565038 CYB561A3Q8NBI2 242 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 Q8NDZ9 215 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 OR52K1Q8NGK4 314 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 OR4A15Q8NGL6 344 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 BAALCQ8WXS3 180 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 TFGQ92734 400 aaPredicted RBP1.54□□□□□ -2.16
PALB2-203ENST00000565038 RNF170Q96K19 258 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 BEX2Q9BXY8 128 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 API5Q9BZZ5 524 aaKnown RBP1.54□□□□□ -2.16
PALB2-203ENST00000565038 ARMC7Q9H6L4 198 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 LZTFL1Q9NQ48 299 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 MYO3BQ8WXR4 1341 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 COL1A1P02452 1464 aaPredicted RBP1.54□□□□□ -2.16
PALB2-203ENST00000565038 ANKRD26Q9UPS8 1709 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 SIPA1L3O60292 1781 aaPredicted RBP1.54□□□□□ -2.16
PALB2-203ENST00000565038 UBR2Q8IWV8 1755 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 NUP98P52948 1817 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 ARFGEF1Q9Y6D6 1849 aa1.54□□□□□ -2.16
PALB2-203ENST00000565038 LAMA2P24043 3122 aaKnown RBP1.53□□□□□ -2.16
PALB2-203ENST00000565038 IGLL5B9A064 214 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 ENSAO43768 121 aaKnown RBP1.53□□□□□ -2.16
PALB2-203ENST00000565038 LCA5LO95447 670 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 ETHE1O95571 254 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 TTC4O95801 387 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 SNAI1O95863 264 aaPredicted RBP1.53□□□□□ -2.16
PALB2-203ENST00000565038 SLC35G6P0C7Q6 338 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 CCDC172P0C7W6 258 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 CD99P14209 185 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 HLA-GP17693 338 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 CD9P21926 228 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 DEKP35659 375 aaKnown RBP1.53□□□□□ -2.16
PALB2-203ENST00000565038 CLDN6P56747 220 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 CARD18P57730 90 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 SLC35A1P78382 337 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 TPBGQ13641 420 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 STK38Q15208 465 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 TMPPEQ6ZT21 453 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 OR2W3Q7Z3T1 314 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 CUL9Q8IWT3 2517 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 SLC7A5P1Q8MH63 180 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 PDCL2Q8N4E4 241 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 ZDHHC22Q8N966 263 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 ORAOV1Q8WV07 137 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 GABRG3Q99928 467 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 GAL3ST2Q9H3Q3 398 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 RDH14Q9HBH5 336 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 ZNF532Q9HCE3 1301 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 CHTOPQ9Y3Y2 248 aaKnown RBP1.53□□□□□ -2.16
PALB2-203ENST00000565038 BZW2Q9Y6E2 419 aaKnown RBP1.53□□□□□ -2.16
PALB2-203ENST00000565038 ICOSQ9Y6W8 199 aa1.53□□□□□ -2.16
PALB2-203ENST00000565038 VIRMAQ69YN4 1812 aaKnown RBP1.52□□□□□ -2.17
PALB2-203ENST00000565038 KDM3BQ7LBC6 1761 aa1.52□□□□□ -2.17
PALB2-203ENST00000565038 DNAH12Q6ZR08 3092 aa1.52□□□□□ -2.17
PALB2-203ENST00000565038 A0A1W2PRF3 423 aa1.52□□□□□ -2.17
PALB2-203ENST00000565038 A0A1W2PRM7 423 aa1.52□□□□□ -2.17
PALB2-203ENST00000565038 DFFAO00273 331 aa1.52□□□□□ -2.17
PALB2-203ENST00000565038 OTCP00480 354 aa1.52□□□□□ -2.17
PALB2-203ENST00000565038 GCGP01275 180 aa1.52□□□□□ -2.17
PALB2-203ENST00000565038 CDK1P06493 297 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms