RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 SULT4A1Q9BR01 284 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 PAPOLGQ9BWT3 736 aaKnown RBP6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 PLK3Q9H4B4 646 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 RHOFQ9HBH0 211 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 PARD6AQ9NPB6 346 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 PPP1R14DQ9NXH3 145 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 KCNIP3Q9Y2W7 256 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 MEMO1Q9Y316 297 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 STARD10Q9Y365 291 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 LIPGQ9Y5X9 500 aa6.22□□□□□ -1.41
HERPUD1-209ENST00000564678 IGKV1D-8A0A087WSZ0 117 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 C13orf42A0A1B0GVH6 325 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 CD300LBA8K4G0 201 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 EEF1E1-BLOC1S5C9J1V9 151 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 BCL2L11O43521 198 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 IL18BPO95998 194 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 IFNA2P01563 188 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 NMBP08949 121 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 PET100P0DJ07 73 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 RBMXP38159 391 aaKnown RBP6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 FGF12P61328 243 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 MPV17LQ2QL34 196 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 PIGYQ3MUY2 71 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 LRRC37A5PQ49AS3 106 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 ATP1A1-AS1Q5TC04 95 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 CST9LP1Q5W188 147 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 ALKAL2Q6UX46 152 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 SEM1Q6ZVN7 128 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 SLC25A26Q70HW3 274 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 LINC00596Q86U02 117 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 PDZD9Q8IXQ8 264 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 BCL6BQ8N143 479 aaPredicted RBP6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 MAFIPQ8WZ33 124 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 ST8SIA2Q92186 375 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 GTF3AQ92664 365 aaKnown RBP6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 PIK3IP1Q96FE7 263 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 GALNT14Q96FL9 552 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 BOD1Q96IK1 185 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 PRRX2Q99811 253 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 SYT3Q9BQG1 590 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 BARX1Q9HBU1 254 aaPredicted RBP6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 C12orf4Q9NQ89 552 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 RDH8Q9NYR8 311 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 SPRR3Q9UBC9 169 aa6.21□□□□□ -1.41
HERPUD1-209ENST00000564678 CACNA1HO95180 2353 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 TRAV17A0A0B4J275 112 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 ZNF503-AS2A6NEH8 195 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 GAGE10A6NGK3 116 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 CRYM-AS1A6NIL9 109 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 OR5B21A6NL26 309 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 ANKRD30BLA7E2S9 258 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 H3BS24 57 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 DIRAS3O95661 229 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 GLAP06280 429 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 PRR20EP86478 221 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 PRR20CP86479 221 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 PRR20DP86480 221 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 PRR20BP86481 221 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 PRR20AP86496 221 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 PMP22Q01453 160 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 NAAAQ02083 359 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 BAMBIQ13145 260 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 IL15RAQ13261 267 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 MRPL49Q13405 166 aaKnown RBP6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 SLC9A3R2Q15599 337 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 C3AR1Q16581 482 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 AANATQ16613 207 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 ANKRD55Q3KP44 614 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 PRSS54Q6PEW0 395 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 P4HA3Q7Z4N8 544 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 ZNF573Q86YE8 665 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 EIF4E3Q8N5X7 224 aaKnown RBP6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 HPSE2Q8WWQ2 592 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 ZNF75AQ96N20 296 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 HDHD3Q9BSH5 251 aaPredicted RBP6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 RNF126Q9BV68 326 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 DNTTIP1Q9H147 329 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 RIMS4Q9H426 269 aaPredicted RBP6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 NCOR1P1Q9H4R4 102 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 METTL8Q9H825 291 aaKnown RBP6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 SPACA1Q9HBV2 294 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 MBD2Q9UBB5 411 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 DNAJB11Q9UBS4 358 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 GPR160Q9UJ42 338 aa6.21□□□□□ -1.42
HERPUD1-209ENST00000564678 FREM2Q5SZK8 3169 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 TEX13DA0A0J9YY54 714 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 ZNF732B4DXR9 585 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 TRAPPC2LH3BP13 241 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 I3L521 148 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 NKX2-8O15522 239 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 OR7C1O76099 320 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 SPDEFO95238 335 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 KNG1P01042 644 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 NGFP01138 241 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 IFNA21P01568 189 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 PI3P19957 117 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 OPRM1P35372 400 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 NUP62P37198 522 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 GLP1RP43220 463 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 HAAOP46952 286 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms