RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 PRSS27Q9BQR3 290 aa1.11□□□□□ -2.23
CHD9-211ENST00000564600 MARVELD1Q9BSK0 173 aa1.11□□□□□ -2.23
CHD9-211ENST00000564600 EBPLQ9BY08 206 aa1.11□□□□□ -2.23
CHD9-211ENST00000564600 DAZ1Q9NQZ3 744 aaKnown RBP1.11□□□□□ -2.23
CHD9-211ENST00000564600 RBM12B-AS1Q9P1G2 102 aa1.11□□□□□ -2.23
CHD9-211ENST00000564600 C14orf166Q9Y224 244 aaKnown RBP1.11□□□□□ -2.23
CHD9-211ENST00000564600 SNX24Q9Y343 169 aa1.11□□□□□ -2.23
CHD9-211ENST00000564600 ZNF780BQ9Y6R6 833 aa1.11□□□□□ -2.23
CHD9-211ENST00000564600 NUP205Q92621 2012 aa1.11□□□□□ -2.23
CHD9-211ENST00000564600 LRPPRCP42704 1394 aaKnown RBP1.1□□□□□ -2.23
CHD9-211ENST00000564600 TRAV8-3A0A0A6YYJ7 113 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 A0A1B0GU33 70 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 A0A1B0GW15 77 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 GOLGA8IPA6NC78 632 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 RBFOX3A6NFN3 312 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 LEUTXA8MZ59 168 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 C15orf65H3BRN8 121 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 I3L4J1 428 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 DENRO43583 198 aaKnown RBP1.1□□□□□ -2.23
CHD9-211ENST00000564600 CYTH3O43739 400 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 CPSF4O95639 269 aaKnown RBP1.1□□□□□ -2.23
CHD9-211ENST00000564600 EPPINO95925 133 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 SEC11BP0C7V7 166 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 GIMD1P0DJR0 217 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 CGB3P0DN86 165 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 CGB7P0DN87 165 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 STC1P52823 247 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 CCL23P55773 120 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 OR2B6P58173 313 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 RBX1P62877 108 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 HBG1P69891 147 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 HBG2P69892 147 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 XRCC4Q13426 336 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 TPBGQ13641 420 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 PAFAH1B3Q15102 231 aaKnown RBP1.1□□□□□ -2.23
CHD9-211ENST00000564600 TRAM1Q15629 374 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 TRIP13Q15645 432 aaPredicted RBP1.1□□□□□ -2.23
CHD9-211ENST00000564600 PYCR3Q53H96 274 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 AMMECR1LQ6DCA0 310 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 WDR59Q6PJI9 974 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 CYHR1Q6ZMK1 362 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 CLEC20AQ6ZU45 233 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 LINC00596Q86U02 117 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 LRRC6Q86X45 466 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 NIT1Q86X76 327 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 CPNE9Q8IYJ1 553 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 ZFP82Q8N141 532 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 MUC15Q8N387 334 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 ZNF680Q8NEM1 530 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 OR4D6Q8NGJ1 314 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 OR4C13Q8NGP0 309 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 OR8S1Q8NH09 359 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 OR2AE1Q8NHA4 323 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 GTF2H4Q92759 462 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 APOBEC3DQ96AK3 386 aaPredicted RBP1.1□□□□□ -2.23
CHD9-211ENST00000564600 CLDN23Q96B33 292 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 PPWD1Q96BP3 646 aaKnown RBP1.1□□□□□ -2.23
CHD9-211ENST00000564600 PKMYT1Q99640 499 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 SEC22CQ9BRL7 303 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 PRRG3Q9BZD7 231 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 SRRQ9GZT4 340 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 TMBIM4Q9HC24 238 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 TREM1Q9NP99 234 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 ZNF492Q9P255 531 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 CD300AQ9UGN4 299 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 ZNF443Q9Y2A4 671 aaPredicted RBP1.1□□□□□ -2.23
CHD9-211ENST00000564600 TRAPPC1Q9Y5R8 145 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 R4GN34 69 aa1.1□□□□□ -2.23
CHD9-211ENST00000564600 NACADO15069 1562 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 CEP170Q5SW79 1584 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 PTPRKQ15262 1439 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 H3BSA7 217 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 POLR3GO15318 223 aaPredicted RBP1.09□□□□□ -2.23
CHD9-211ENST00000564600 TOX3O15405 576 aaPredicted RBP1.09□□□□□ -2.23
CHD9-211ENST00000564600 CXorf1O96002 111 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 OPN1SWP03999 348 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 SOD3P08294 240 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 SCGB1C2P0DMR2 95 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 HRES1P13985 223 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 PSMB6P28072 239 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 DHRS2Q13268 280 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 UBE2NLQ5JXB2 153 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 ERICH5Q6P6B1 374 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 AHSA2Q719I0 299 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 LYZL2Q7Z4W2 148 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 SYCE1Q8N0S2 351 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 Q8NAQ8 132 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 OR52E4Q8NGH9 312 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 OR5AK3PQ8NH89 298 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 ACTL9Q8TC94 416 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 SCGB1C1Q8TD33 95 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 LRRC45Q96CN5 670 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 DDIT4LQ96D03 193 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 FMC1Q96HJ9 113 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 ATP6V1G3Q96LB4 118 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 CATSPER2Q96P56 530 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 TRNT1Q96Q11 434 aaKnown RBP1.09□□□□□ -2.23
CHD9-211ENST00000564600 OR2V2Q96R30 315 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 SHANK2-AS3Q9BTD1 123 aa1.09□□□□□ -2.23
CHD9-211ENST00000564600 OR2D2Q9H210 308 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms