RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 TESK1Q15569 626 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 IGFBP7Q16270 282 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 TMEM128Q5BJH2 165 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 FAM209AQ5JX71 171 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 AADACL3Q5VUY0 350 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 ZNF826PQ6ZT77 177 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 LYG2Q86SG7 212 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 GAPTQ8N292 157 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 C12orf45Q8N5I9 185 aaPredicted RBP13.13□□□□□ -0.31
COMMD4-210ENST00000564587 MRPL30Q8TCC3 161 aaKnown RBP13.13□□□□□ -0.31
COMMD4-210ENST00000564587 Q8TCH9 128 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 DYRK2Q92630 601 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 MRGPRFQ96AM1 343 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 PLPPR2Q96GM1 343 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 ZNF2Q9BSG1 426 aaPredicted RBP13.13□□□□□ -0.31
COMMD4-210ENST00000564587 EGLN1Q9GZT9 426 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 WDR13Q9H1Z4 485 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 TMEM165Q9HC07 324 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 ZNF222Q9UK12 451 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 TENM4Q6N022 2769 aa13.13□□□□□ -0.31
COMMD4-210ENST00000564587 FAM221AA4D161 298 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 NKX2-6A6NCS4 301 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 TUBAL3A6NHL2 446 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 SIRPB1O00241 398 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 FABP7O15540 132 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 SNAPC5O75971 98 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 DIRAS3O95661 229 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 IGHV1-46P01743 117 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 C1QBP02746 253 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 TK1P04183 234 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 CTSDP07339 412 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-210ENST00000564587 GSTT2P0CG29 244 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 PGAM2P15259 253 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 ZBTB25P24278 435 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 APOBEC3AP31941 199 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-210ENST00000564587 SERPINF1P36955 418 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 NPY4RP50391 375 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 UCP3P55916 312 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 DHODHQ02127 395 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 ZNF660Q6AZW8 331 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-210ENST00000564587 LPCAT3Q6P1A2 487 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 MUC20Q8N307 709 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-210ENST00000564587 OR11H7Q8NGC8 314 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 OR4A4PQ8NGN8 299 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 LILRB1Q8NHL6 650 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-210ENST00000564587 ITLN1Q8WWA0 313 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 FYTTD1Q96QD9 318 aaKnown RBP13.12□□□□□ -0.31
COMMD4-210ENST00000564587 ZNF436Q9C0F3 470 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-210ENST00000564587 CLEC4MQ9H2X3 399 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-210ENST00000564587 RANBP3Q9H6Z4 567 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-210ENST00000564587 RNF7Q9UBF6 113 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 MGAT4CQ9UBM8 478 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 FBXO9Q9UK97 447 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-210ENST00000564587 PCDHB10Q9UN67 800 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 RNF115Q9Y4L5 304 aa13.12□□□□□ -0.31
COMMD4-210ENST00000564587 A0A0B4J2A0 478 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-210ENST00000564587 TMEM30CPA0ZSE6 113 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 OR5H14A6NHG9 310 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 C17orf100A8MU93 164 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 A8MV72 311 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-210ENST00000564587 SHISA9B4DS77 424 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 B9A039 149 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 M0R233 179 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 C1QL1O75973 258 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 LHBP01229 141 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 HLA-AP01891 365 aaKnown RBP13.11□□□□□ -0.31
COMMD4-210ENST00000564587 GIPP09681 153 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-210ENST00000564587 IRF2P14316 349 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 ERP29P30040 261 aaKnown RBP13.11□□□□□ -0.31
COMMD4-210ENST00000564587 HERV-K104P61576 105 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 IL13RA1P78552 427 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 PAX5Q02548 391 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 DHRS2Q13268 280 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 EFNB3Q15768 340 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 SLC35E4Q6ICL7 350 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 ADAM5Q6NVV9 412 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 ZNF497Q6ZNH5 498 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 NOXA1Q86UR1 476 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 OR2AK2Q8NG84 335 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 PHB2Q99623 299 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 MS4A5Q9H3V2 200 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 DNAJB11Q9UBS4 358 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 OR14J1Q9UGF5 321 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 SLC23A1Q9UHI7 598 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 SHPKQ9UHJ6 478 aa13.11□□□□□ -0.31
COMMD4-210ENST00000564587 IGHV3-64DA0A0J9YX35 117 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 C9orf170A2RU37 121 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 LRRC30A6NM36 301 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 HSPB6O14558 160 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 ATXN7O15265 892 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-210ENST00000564587 DUS4LO95620 317 aaKnown RBP13.1□□□□□ -0.31
COMMD4-210ENST00000564587 ZNF728P0DKX0 622 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 CD34P28906 385 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 FCGR2CP31995 323 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 RAP2BP61225 183 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 HLA-DRB3P79483 266 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 LIN54Q6MZP7 749 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 MOGAT3Q86VF5 341 aa13.1□□□□□ -0.31
COMMD4-210ENST00000564587 OR52B4Q8NGK2 314 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms