RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 THNSL2Q86YJ6 484 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 PQLC1Q8N2U9 271 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 ZNF555Q8NEP9 628 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 OR10A7Q8NGE5 316 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 OR9G1Q8NH87 305 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 CNIH3Q8TBE1 160 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 GPR148Q8TDV2 347 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 RBM14Q96PK6 669 aaKnown RBP12.01□□□□□ -0.49
SPG7-210ENST00000564409 GPER1Q99527 375 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 SLC29A1Q99808 456 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 PDCD1LG2Q9BQ51 273 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 SLC25A33Q9BSK2 321 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 S100A14Q9HCY8 104 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 AMBNQ9NP70 447 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 FGF20Q9NP95 211 aaPredicted RBP12.01□□□□□ -0.49
SPG7-210ENST00000564409 AASSQ9UDR5 926 aa12.01□□□□□ -0.49
SPG7-210ENST00000564409 PRKDCP78527 4128 aaKnown RBP12□□□□□ -0.49
SPG7-210ENST00000564409 ADARB2-AS1A8MUL3 147 aa12□□□□□ -0.49
SPG7-210ENST00000564409 E9PI62 339 aa12□□□□□ -0.49
SPG7-210ENST00000564409 H0YJX3 145 aa12□□□□□ -0.49
SPG7-210ENST00000564409 FAM106CPP0CH98 169 aa12□□□□□ -0.49
SPG7-210ENST00000564409 CGB3P0DN86 165 aa12□□□□□ -0.49
SPG7-210ENST00000564409 CGB7P0DN87 165 aa12□□□□□ -0.49
SPG7-210ENST00000564409 JUNBP17275 347 aaPredicted RBP12□□□□□ -0.49
SPG7-210ENST00000564409 ATXN7L3Q14CW9 347 aaPredicted RBP12□□□□□ -0.49
SPG7-210ENST00000564409 RSU1Q15404 277 aa12□□□□□ -0.49
SPG7-210ENST00000564409 C17orf58Q2M2W7 97 aa12□□□□□ -0.49
SPG7-210ENST00000564409 PAN3Q58A45 887 aaKnown RBP12□□□□□ -0.49
SPG7-210ENST00000564409 RNF144BQ7Z419 303 aa12□□□□□ -0.49
SPG7-210ENST00000564409 CENPVQ7Z7K6 275 aaPredicted RBP12□□□□□ -0.49
SPG7-210ENST00000564409 OR5AU1Q8NGC0 362 aa12□□□□□ -0.49
SPG7-210ENST00000564409 KIRREL1Q96J84 757 aa12□□□□□ -0.49
SPG7-210ENST00000564409 MMP28Q9H239 520 aa12□□□□□ -0.49
SPG7-210ENST00000564409 IFT22Q9H7X7 185 aa12□□□□□ -0.49
SPG7-210ENST00000564409 ZNF286AQ9HBT8 521 aa12□□□□□ -0.49
SPG7-210ENST00000564409 PAK1IP1Q9NWT1 392 aaPredicted RBP12□□□□□ -0.49
SPG7-210ENST00000564409 MEIKINA0A087WXM9 373 aa11.99□□□□□ -0.49
SPG7-210ENST00000564409 LIMS3P0CW19 117 aa11.99□□□□□ -0.49
SPG7-210ENST00000564409 LIMS4P0CW20 117 aa11.99□□□□□ -0.49
SPG7-210ENST00000564409 NHLRC3Q5JS37 347 aa11.99□□□□□ -0.49
SPG7-210ENST00000564409 Q6ZS46 218 aa11.99□□□□□ -0.49
SPG7-210ENST00000564409 LINC00596Q86U02 117 aa11.99□□□□□ -0.49
SPG7-210ENST00000564409 SATL1Q86VE3 508 aa11.99□□□□□ -0.49
SPG7-210ENST00000564409 WFDC9Q8NEX5 89 aa11.99□□□□□ -0.49
SPG7-210ENST00000564409 TNFAIP8L1Q8WVP5 186 aa11.99□□□□□ -0.49
SPG7-210ENST00000564409 RPEQ96AT9 228 aa11.99□□□□□ -0.49
SPG7-210ENST00000564409 OR5M11Q96RB7 305 aa11.99□□□□□ -0.49
SPG7-210ENST00000564409 PPIL3Q9H2H8 161 aaKnown RBP11.99□□□□□ -0.49
SPG7-210ENST00000564409 TMEM138Q9NPI0 162 aa11.99□□□□□ -0.49
SPG7-210ENST00000564409 IL36GQ9NZH8 169 aa11.99□□□□□ -0.49
SPG7-210ENST00000564409 KIF25Q9UIL4 384 aa11.99□□□□□ -0.49
SPG7-210ENST00000564409 TRAV24A0A0B4J272 114 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 NPIPB11E5RHQ5 1161 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 J3QR06 171 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 EBAG9O00559 213 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 GABRPO00591 440 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 GZMHP20718 246 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 NFYBP25208 207 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 GDNFP39905 211 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 GLP1RP43220 463 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 PPP3R1P63098 170 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 MED21Q13503 144 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 BAIAP2L2Q6UXY1 529 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 LYG1Q8N1E2 194 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 OR4X2Q8NGF9 303 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 TMEM106AQ96A25 262 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 NR1H4Q96RI1 486 aaPredicted RBP11.98□□□□□ -0.49
SPG7-210ENST00000564409 C8orf4Q9NR00 106 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 SMPD3Q9NY59 655 aaPredicted RBP11.98□□□□□ -0.49
SPG7-210ENST00000564409 CALYQ9NYX4 217 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 IDI2-AS1Q9NZ38 188 aa11.98□□□□□ -0.49
SPG7-210ENST00000564409 TSSC4Q9Y5U2 329 aaPredicted RBP11.98□□□□□ -0.49
SPG7-210ENST00000564409 OGG1O15527 345 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 ZNF780AO75290 641 aaPredicted RBP11.97□□□□□ -0.49
SPG7-210ENST00000564409 WBP4O75554 376 aaKnown RBP11.97□□□□□ -0.49
SPG7-210ENST00000564409 IL1AP01583 271 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 CSTBP04080 98 aaKnown RBP11.97□□□□□ -0.49
SPG7-210ENST00000564409 MYL12AP19105 171 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 OR3A4PP47883 348 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 RAB7AP51149 207 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 MADCAM1Q13477 382 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 RBM39Q14498 530 aaKnown RBP11.97□□□□□ -0.49
SPG7-210ENST00000564409 ZSCAN26Q16670 478 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 ABCA11PQ4W5N1 156 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 OR8H3Q8N146 312 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 APH1BQ8WW43 257 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 RGP1Q92546 391 aaPredicted RBP11.97□□□□□ -0.49
SPG7-210ENST00000564409 TOMM40LQ969M1 308 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 S100A13Q99584 98 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 FAM192AQ9GZU8 254 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 METTL9Q9H1A3 318 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 NECAP2Q9NVZ3 263 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 ING3Q9NXR8 418 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 TAS2R4Q9NYW5 299 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 ZNF281Q9Y2X9 895 aa11.97□□□□□ -0.49
SPG7-210ENST00000564409 TCRBV4S1A1TA0A5B7 111 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 FAM172BPA6NC97 362 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 FAM90A18PA6NE21 464 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 FAM90A16PA6NEW6 464 aa11.96□□□□□ -0.49
SPG7-210ENST00000564409 FAM90A20PA6NIJ5 464 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms