RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 C9JQL5 133 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 SYNGR1O43759 233 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 CDS2O95674 445 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 SPP1P10451 314 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 GNMTQ14749 295 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 HERPUD1Q15011 391 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 RNPS1Q15287 305 aaKnown RBP17.12■□□□□ 0.33
MSLN-205ENST00000563941 FAM76BQ5HYJ3 339 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 MCEMP1Q8IX19 187 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 OR5A2Q8NGI9 324 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 KIRREL1Q96J84 757 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 HIST1H2AAQ96QV6 131 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 ARHGAP21Q5T5U3 1957 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 FAM157AC9JC47 383 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 DANCRP0C864 163 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 MEOX1P50221 254 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 RND3P61587 244 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 ZNF818PQ6ZRF7 136 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 OPA3Q9H6K4 179 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 DNAJC13O75165 2243 aa17.12■□□□□ 0.33
MSLN-205ENST00000563941 NME2P1O60361 137 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 TSPAN15O95858 294 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 CD59P13987 128 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 PRKACAP17612 351 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 MIDNQ504T8 468 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 ZNF695Q8IW36 515 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 GAPTQ8N292 157 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 TMEM56Q96MV1 263 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 IL17BQ9UHF5 180 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 TMEM56-RWDD3S4R434 201 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 IGKV1D-13A0A0B4J2D9 117 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 KIR2DS1A0A191URI9 304 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 SLC22A20A6NK97 555 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 SP1P08047 785 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 IGKV1-13P0DP09 117 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 NFYBP25208 207 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 KIR2DS4P43632 304 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 KIR2DS1Q14954 304 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 OR5P3Q8WZ94 311 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 SH3BGRL3Q9H299 93 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 PRSS50Q9UI38 385 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 LHX6Q9UPM6 363 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 PRELID3BQ9Y3B1 194 aa17.11■□□□□ 0.33
MSLN-205ENST00000563941 MED13Q9UHV7 2174 aa17.1■□□□□ 0.33
MSLN-205ENST00000563941 M0R296 226 aa17.1■□□□□ 0.33
MSLN-205ENST00000563941 TUSC2O75896 110 aa17.1■□□□□ 0.33
MSLN-205ENST00000563941 EWSR1Q01844 656 aaKnown RBP eCLIP17.1■□□□□ 0.33
MSLN-205ENST00000563941 ZNF616Q08AN1 781 aa17.1■□□□□ 0.33
MSLN-205ENST00000563941 SELENOHQ8IZQ5 122 aaKnown RBP17.1■□□□□ 0.33
MSLN-205ENST00000563941 BOD1Q96IK1 185 aa17.1■□□□□ 0.33
MSLN-205ENST00000563941 ZNF488Q96MN9 340 aa17.1■□□□□ 0.33
MSLN-205ENST00000563941 C11orf1Q9H5F2 150 aa17.1■□□□□ 0.33
MSLN-205ENST00000563941 LUZP4Q9P127 313 aa17.1■□□□□ 0.33
MSLN-205ENST00000563941 KLF13Q9Y2Y9 288 aaPredicted RBP17.1■□□□□ 0.33
MSLN-205ENST00000563941 LIPGQ9Y5X9 500 aa17.1■□□□□ 0.33
MSLN-205ENST00000563941 ATP23Q9Y6H3 246 aa17.1■□□□□ 0.33
MSLN-205ENST00000563941 IGKV1-6A0A0C4DH72 117 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 ANKRD30BLA7E2S9 258 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 LILRA1O75019 489 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 MT-CO3P00414 261 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 SP9P0CG40 484 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 SPINK2P20155 84 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 APLNRP35414 380 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 WNT5AP41221 380 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 HIKESHIQ53FT3 197 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 SUMF1Q8NBK3 374 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 HSD17B11Q8NBQ5 300 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 GPHA2Q96T91 129 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 SPIN2AQ99865 258 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 SPIN2BQ9BPZ2 258 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 C12orf49Q9H741 205 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 MLXQ9UH92 298 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 HSD17B6O14756 317 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 IL32P24001 234 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 SNCAP37840 140 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 NKX2-1P43699 371 aaPredicted RBP17.09■□□□□ 0.33
MSLN-205ENST00000563941 CAMLGP49069 296 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 OR2C3Q8N628 320 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 SUMF2Q8NBJ7 301 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 MDS2Q8NDY4 140 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 AKR1E2Q96JD6 320 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 OR51B6Q9H340 312 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 PLK3Q9H4B4 646 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 CACFD1Q9UGQ2 172 aa17.09■□□□□ 0.33
MSLN-205ENST00000563941 FAM24AA6NFZ4 105 aa17.08■□□□□ 0.33
MSLN-205ENST00000563941 HEXAP06865 529 aa17.08■□□□□ 0.33
MSLN-205ENST00000563941 CTXN2P0C2S0 81 aa17.08■□□□□ 0.33
MSLN-205ENST00000563941 FHITP49789 147 aa17.08■□□□□ 0.33
MSLN-205ENST00000563941 ASCL1P50553 236 aa17.08■□□□□ 0.33
MSLN-205ENST00000563941 POLR2GP62487 172 aaKnown RBP eCLIP17.08■□□□□ 0.33
MSLN-205ENST00000563941 LINC00596Q86U02 117 aa17.08■□□□□ 0.33
MSLN-205ENST00000563941 SPACA1Q9HBV2 294 aa17.08■□□□□ 0.33
MSLN-205ENST00000563941 CCL28Q9NRJ3 127 aa17.08■□□□□ 0.33
MSLN-205ENST00000563941 C19orf12Q9NSK7 152 aa17.08■□□□□ 0.33
MSLN-205ENST00000563941 MPC1Q9Y5U8 109 aa17.08■□□□□ 0.33
MSLN-205ENST00000563941 KLRC4-KLRK1H3BQV0 150 aa17.08■□□□□ 0.32
MSLN-205ENST00000563941 ADAM20O43506 726 aa17.08■□□□□ 0.32
MSLN-205ENST00000563941 C1QL1O75973 258 aa17.08■□□□□ 0.32
MSLN-205ENST00000563941 ZNF573Q86YE8 665 aa17.08■□□□□ 0.32
MSLN-205ENST00000563941 COMMD1Q8N668 190 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms