RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 PDCD6O75340 191 aa10.24□□□□□ -0.77
ABCA3-203ENST00000563623 IFNA5P01569 189 aa10.24□□□□□ -0.77
ABCA3-203ENST00000563623 PAX6P26367 422 aa10.24□□□□□ -0.77
ABCA3-203ENST00000563623 MRPS34P82930 218 aaKnown RBP10.24□□□□□ -0.77
ABCA3-203ENST00000563623 ZNF239Q16600 458 aaKnown RBP10.24□□□□□ -0.77
ABCA3-203ENST00000563623 CLEC12BQ2HXU8 276 aa10.24□□□□□ -0.77
ABCA3-203ENST00000563623 PYY3Q5JQD4 70 aa10.24□□□□□ -0.77
ABCA3-203ENST00000563623 UNQ6494/PRO21346Q6UXR6 183 aa10.24□□□□□ -0.77
ABCA3-203ENST00000563623 C17orf82Q86X59 251 aaPredicted RBP10.24□□□□□ -0.77
ABCA3-203ENST00000563623 ZNF610Q8N9Z0 462 aa10.24□□□□□ -0.77
ABCA3-203ENST00000563623 LRFN1Q9P244 771 aa10.24□□□□□ -0.77
ABCA3-203ENST00000563623 ADAMTS9Q9P2N4 1935 aa10.24□□□□□ -0.77
ABCA3-203ENST00000563623 EML6Q6ZMW3 1958 aa10.24□□□□□ -0.77
ABCA3-203ENST00000563623 PPP1R2P9O14990 202 aa10.24□□□□□ -0.77
ABCA3-203ENST00000563623 CNOT4O95628 575 aaKnown RBP10.24□□□□□ -0.77
ABCA3-203ENST00000563623 RAB4AP20338 218 aa10.24□□□□□ -0.77
ABCA3-203ENST00000563623 RSPO1Q2MKA7 263 aaPredicted RBP10.24□□□□□ -0.77
ABCA3-203ENST00000563623 EXTL1Q92935 676 aa10.24□□□□□ -0.77
ABCA3-203ENST00000563623 EGLN1Q9GZT9 426 aa10.24□□□□□ -0.77
ABCA3-203ENST00000563623 PLEKHF2Q9H8W4 249 aa10.24□□□□□ -0.77
ABCA3-203ENST00000563623 KNTC1P50748 2209 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 EYSQ5T1H1 3165 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 A0A0J9YW62 118 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 CXCL13O43927 109 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 NPBWR2P48146 333 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 CCL7P80098 99 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 IZUMO4Q1ZYL8 232 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 LHFPL2Q6ZUX7 228 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 TMEM252Q8N6L7 170 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 UBALD1Q8TB05 177 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 SCGB1C1Q8TD33 95 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 BOD1Q96IK1 185 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 SMOC1Q9H4F8 434 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 MYO15AQ9UKN7 3530 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 IGKV1-12A0A0C4DH73 117 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 CHST1O43916 411 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 IGKV1D-12P01611 117 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 FUT3P21217 361 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 DTYMKP23919 212 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 TMEM267Q0VDI3 215 aaPredicted RBP10.23□□□□□ -0.77
ABCA3-203ENST00000563623 KCNMB1Q16558 191 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 CEACAM16Q2WEN9 425 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 OR2T2Q6IF00 324 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 GAPTQ8N292 157 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 IL22RA1Q8N6P7 574 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 ZNF611Q8N823 705 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 MSI2Q96DH6 328 aaKnown RBP10.23□□□□□ -0.77
ABCA3-203ENST00000563623 GPR61Q9BZJ8 451 aa10.23□□□□□ -0.77
ABCA3-203ENST00000563623 SHISA7A6NL88 538 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 TRGC2P03986 189 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 CCL2P13500 99 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 FABP4P15090 132 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 S100A7P31151 101 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 FGF8P55075 233 aaPredicted RBP10.22□□□□□ -0.77
ABCA3-203ENST00000563623 CRIP3Q6Q6R5 217 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 ZNF574Q6ZN55 896 aaPredicted RBP10.22□□□□□ -0.77
ABCA3-203ENST00000563623 SMRP1Q8NCR6 262 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 ADPRHL1Q8NDY3 354 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 GALNT14Q96FL9 552 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 TAAR9Q96RI9 348 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 FOXI3A8MTJ6 420 aaPredicted RBP10.22□□□□□ -0.77
ABCA3-203ENST00000563623 K7N7A8 449 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 IAPPP10997 89 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 ZNF92Q03936 586 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 SRYQ05066 204 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 KMT5CQ86Y97 462 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 TVP23CQ96ET8 276 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 TUBA4BQ9H853 241 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 CCL28Q9NRJ3 127 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 PI4KAP42356 2102 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 SERPINE2P07093 398 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 ALDH3B1P43353 468 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 CARD18P57730 90 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 PKIAP61925 76 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 RAB35Q15286 201 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 MPV17LQ2QL34 196 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 OR5T1Q8NG75 326 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 SSC4DQ8WTU2 575 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 MOB3AQ96BX8 217 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 NTNG2Q96CW9 530 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 C18orf12Q96KH6 178 aa10.22□□□□□ -0.77
ABCA3-203ENST00000563623 PTPRZ1P23471 2315 aaPredicted RBP10.22□□□□□ -0.77
ABCA3-203ENST00000563623 A0A096LPE4 126 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 A0A1W2PPZ6 126 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 TRDCB7Z8K6 153 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 VAMP5O95183 116 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 CXCL1P09341 107 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 SCTP09683 121 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 TLE4Q04727 773 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 SLC25A53Q5H9E4 307 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 GFI1BQ5VTD9 330 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 ZNF385CQ66K41 422 aaPredicted RBP10.21□□□□□ -0.77
ABCA3-203ENST00000563623 SPNS3Q6ZMD2 512 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 WDR5BQ86VZ2 330 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 NECAP1Q8NC96 275 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 SNIP1Q8TAD8 396 aaKnown RBP10.21□□□□□ -0.77
ABCA3-203ENST00000563623 Q8WTZ3 238 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 RDH5Q92781 318 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 SEBOXQ9HB31 216 aaPredicted RBP10.21□□□□□ -0.77
ABCA3-203ENST00000563623 OCIAD1Q9NX40 245 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms