RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 STATHP02808 62 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 ACTL10Q5JWF8 245 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 RNFT1Q5M7Z0 435 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 ZNF595Q8IYB9 648 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 OR4D5Q8NGN0 318 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 PLPPR1Q8TBJ4 325 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 NEUROG1Q92886 237 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 ARHGAP5-AS1Q96IT6 56 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 MRPL13Q9BYD1 178 aaKnown RBP5.54□□□□□ -1.52
CLK3-212ENST00000563418 KLK13Q9UKR3 277 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 A0A1B0GW15 77 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 DDNO94850 711 aaPredicted RBP5.54□□□□□ -1.52
CLK3-212ENST00000563418 FAHP16930 419 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 HOXD9P28356 352 aaPredicted RBP5.54□□□□□ -1.52
CLK3-212ENST00000563418 ABHD17CQ6PCB6 329 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 SLC16A11Q8NCK7 471 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 SPSB1Q96BD6 273 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 C16orf70Q9BSU1 422 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 SPHK2Q9NRA0 654 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 ANXA10Q9UJ72 324 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 GPR132Q9UNW8 380 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 INSL5Q9Y5Q6 135 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 SPAG17Q6Q759 2223 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 MPDU1O75352 247 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 LPAR4Q99677 370 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 QTRT1Q9BXR0 403 aaKnown RBP5.54□□□□□ -1.52
CLK3-212ENST00000563418 GPR62Q9BZJ7 368 aa5.54□□□□□ -1.52
CLK3-212ENST00000563418 TRBV5-5A0A0J9YX44 114 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 CXorf51AA0A1B0GTR3 108 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 KCNQ2O43526 872 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 EIF4E2O60573 245 aaKnown RBP5.53□□□□□ -1.52
CLK3-212ENST00000563418 SLC35E2P0CK97 266 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 NTHL1P78549 312 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 ANKRD55Q3KP44 614 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 ANKRD37Q7Z713 158 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 BIVMQ86UB2 503 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 CLDND2Q8NHS1 167 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 GPX7Q96SL4 187 aaPredicted RBP5.53□□□□□ -1.52
CLK3-212ENST00000563418 MMP25Q9NPA2 562 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 TMEM38BQ9NVV0 291 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 MRPL16Q9NX20 251 aaKnown RBP5.53□□□□□ -1.52
CLK3-212ENST00000563418 SMCHD1A6NHR9 2005 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 A0A0A6YYC8 382 aaPredicted RBP5.53□□□□□ -1.52
CLK3-212ENST00000563418 I3L1I5 382 aaPredicted RBP5.53□□□□□ -1.52
CLK3-212ENST00000563418 TMPRSS11DO60235 418 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 PPBPP02775 128 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 POU2AF1Q16633 256 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 SCD5Q86SK9 330 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 OR2K2Q8NGT1 345 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 CDX2Q99626 313 aaPredicted RBP5.53□□□□□ -1.52
CLK3-212ENST00000563418 SERTAD3Q9UJW9 196 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 CXCL14O95715 111 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 SMIM17P0DL12 118 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 P2RY6Q15077 328 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 SDF2L1Q9HCN8 221 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 G6PC2Q9NQR9 355 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 MBLAC1A4D2B0 266 aaPredicted RBP5.53□□□□□ -1.52
CLK3-212ENST00000563418 CA3P07451 260 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 METAP1P53582 386 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 PMP22Q01453 160 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 TIMM23BQ5SRD1 257 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 C10orf126Q8N4M7 172 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 METTL27Q8N6F8 245 aaPredicted RBP5.53□□□□□ -1.52
CLK3-212ENST00000563418 OR52E5Q8NH55 327 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 OR51H1Q8NH63 302 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.53□□□□□ -1.52
CLK3-212ENST00000563418 A0A0U1RQF3 1178 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 IAPPP10997 89 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 CLDN15P56746 228 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 CCSMST1Q4G0I0 132 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 HES4Q9HCC6 221 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 SYNGR2O43760 224 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 RAMP1O60894 148 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 GPR183P32249 361 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 SRSF3P84103 164 aaKnown RBP5.53□□□□□ -1.52
CLK3-212ENST00000563418 EIF3IQ13347 325 aaKnown RBP5.53□□□□□ -1.52
CLK3-212ENST00000563418 SELENOHQ8IZQ5 122 aaKnown RBP5.53□□□□□ -1.52
CLK3-212ENST00000563418 LRP12Q9Y561 859 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 OR4C45A6NMZ5 311 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 K7EP13 123 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 AGBL5Q8NDL9 886 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 GEMIN7Q9H840 131 aaKnown RBP5.53□□□□□ -1.52
CLK3-212ENST00000563418 SH2D2AQ9NP31 389 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 IGSF23A1L1A6 192 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 MPPED1O15442 326 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 ALOX12BO75342 701 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 TDGF1P13385 188 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 CEACAM6P40199 344 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 HERVK_113P61574 105 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 FUT7Q11130 342 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 RIGQ13278 110 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 UNQ9370/PRO34162Q6UXP9 181 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 OR10G3Q8NGC4 313 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 MS4A6AQ9H2W1 248 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 CLEC5AQ9NY25 188 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 FLRT3Q9NZU0 649 aa5.53□□□□□ -1.52
CLK3-212ENST00000563418 GDF9O60383 454 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 NXPH3O95157 252 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 IGLV3-25P01717 112 aa5.52□□□□□ -1.53
CLK3-212ENST00000563418 RAE1P78406 368 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms