RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 TMEM249Q2WGJ8 235 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 HFEQ30201 348 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 GLT8D1Q68CQ7 371 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 GDPGP1Q6ZNW5 385 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 SLC25A26Q70HW3 274 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 KRT74Q7RTS7 529 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 BIVMQ86UB2 503 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 CALHM1Q8IU99 346 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 C11orf53Q8IXP5 236 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 NKAIN3Q8N8D7 197 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 SCCPDHQ8NBX0 429 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 OR51F2Q8NH61 342 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 NDNFQ8TB73 568 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 LRRC29Q8WV35 223 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 AQP3Q92482 292 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 CCL17Q92583 94 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 RDH5Q92781 318 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 SLAMF9Q96A28 289 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 ZNF488Q96MN9 340 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 METTL17Q9H7H0 456 aaPredicted RBP4.25□□□□□ -1.73
CNOT1-205ENST00000563283 PLGRKTQ9HBL7 147 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 ZNF580Q9UK33 172 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 MRPS28Q9Y2Q9 187 aaKnown RBP4.25□□□□□ -1.73
CNOT1-205ENST00000563283 POLDIP2Q9Y2S7 368 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 NAV3Q8IVL0 2385 aa4.25□□□□□ -1.73
CNOT1-205ENST00000563283 IGHV3OR15-7A0A075B7D8 119 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 A0A0B4J203 849 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 ISPDA4D126 451 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 DPPA5A6NC42 116 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 FAM157AC9JC47 383 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 CLDN25C9JDP6 229 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 TRAPPC2LH3BP13 241 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 TMEM178BH3BS89 294 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 NDUFS8O00217 210 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 PPIHO43447 177 aaKnown RBP4.24□□□□□ -1.73
CNOT1-205ENST00000563283 AKR7A2O43488 359 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 NXPH2O95156 264 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 PTBP3O95758 552 aaKnown RBP4.24□□□□□ -1.73
CNOT1-205ENST00000563283 CALCBP10092 127 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 SLC2A2P11168 524 aaPredicted RBP4.24□□□□□ -1.73
CNOT1-205ENST00000563283 EGR1P18146 543 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 RAB3BP20337 219 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 USF1P22415 310 aaPredicted RBP4.24□□□□□ -1.73
CNOT1-205ENST00000563283 PTGFRP43088 359 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 THBS3P49746 956 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 PDLIM4P50479 330 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 TMBIM6P55061 237 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 SNU13P55769 128 aaKnown RBP4.24□□□□□ -1.73
CNOT1-205ENST00000563283 CAV3P56539 151 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 CLDN12P56749 244 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 ZP1P60852 638 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 MRPS11P82912 194 aaKnown RBP4.24□□□□□ -1.73
CNOT1-205ENST00000563283 PDZK1IP1Q13113 114 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 SPCS2Q15005 226 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 RSU1Q15404 277 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 CTF1Q16619 201 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 SLC22A6Q4U2R8 563 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 FAM76BQ5HYJ3 339 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 FAM201AQ5SY85 155 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 AVPI1Q5T686 147 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 HES5Q5TA89 166 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 FAM90A2PQ658T7 463 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 RUSC1-AS1Q66K80 236 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 CLEC2AQ6UVW9 174 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 GLIPR1L1Q6UWM5 242 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 WDR82Q6UXN9 313 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 USP43Q70EL4 1123 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 TPRA1Q86W33 373 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 C19orf18Q8NEA5 215 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 DEFB108BQ8NET1 73 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 OR4D6Q8NGJ1 314 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 OR6M1Q8NGM8 313 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 OR10K1Q8NGX5 313 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 CLDND2Q8NHS1 167 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 ZNF671Q8TAW3 534 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 ABHD5Q8WTS1 349 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 RAB2BQ8WUD1 216 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 ERGIC1Q969X5 290 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 FAM46BQ96A09 425 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 ISOC1Q96CN7 298 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 MSI2Q96DH6 328 aaKnown RBP4.24□□□□□ -1.73
CNOT1-205ENST00000563283 S100A13Q99584 98 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 GFI1Q99684 422 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 PKIBQ9C010 78 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 FAM234AQ9H0X4 552 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 TLNRD1Q9H1K6 362 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 WDR13Q9H1Z4 485 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 DCSTAMPQ9H295 470 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 KCNK15Q9H427 330 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 NARFLQ9H6Q4 476 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 CHODLQ9H9P2 273 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 TMEM106BQ9NUM4 274 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 DAPK2Q9UIK4 370 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 ING4Q9UNL4 249 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 CEPT1Q9Y6K0 416 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 V9GY05 133 aa4.24□□□□□ -1.73
CNOT1-205ENST00000563283 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.23□□□□□ -1.731e-6■■■□□ 16.8
CNOT1-205ENST00000563283 IGKV2D-30A0A075B6S6 120 aa4.23□□□□□ -1.73
CNOT1-205ENST00000563283 IGKV1-12A0A0C4DH73 117 aa4.23□□□□□ -1.73
CNOT1-205ENST00000563283 A0A0G2JK05 382 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms