RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 RNF175Q8N4F7 328 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 PP6455Q8WZ26 134 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 DDB2Q92466 427 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 PGLYRP2Q96PD5 576 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 TIMP4Q99727 224 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 C16orf70Q9BSU1 422 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 DOHHQ9BU89 302 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 ANKRD10Q9NXR5 420 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 LSM5Q9Y4Y9 91 aaKnown RBP8.15□□□□□ -1.11
CDH1-205ENST00000562836 DNAJC15Q9Y5T4 150 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 INSIG2Q9Y5U4 225 aa8.15□□□□□ -1.11
CDH1-205ENST00000562836 KBTBD11-OT1A0A1B0GTJ5 212 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 TMEM189A5PLL7 270 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 J3QR89 54 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 M0R1X1 148 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 HLA-DPB1P04440 258 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 PSG4Q00888 419 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 SPRYD7Q5W111 196 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 FAM19A5Q7Z5A7 132 aaPredicted RBP8.14□□□□□ -1.11
CDH1-205ENST00000562836 OOSP2Q86WS3 158 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 PHYKPLQ8IUZ5 450 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 ZNF808Q8N4W9 903 aaPredicted RBP8.14□□□□□ -1.11
CDH1-205ENST00000562836 OR5B3Q8NH48 314 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 NUDT22Q9BRQ3 303 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 PNRC2Q9NPJ4 139 aaKnown RBP8.14□□□□□ -1.11
CDH1-205ENST00000562836 CCL15-CCL14A0A0B4J2E2 113 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 C7orf71A4D174 169 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 TLCD2A6NGC4 264 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 OOEPA6NGQ2 149 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 SLC22A20A6NK97 555 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 TMEM229AB2RXF0 380 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 DIRC3C9JPN6 131 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 MLNRO43193 412 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 LATO43561 262 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 CELA2BP08218 269 aaPredicted RBP8.14□□□□□ -1.11
CDH1-205ENST00000562836 NHLRC4P0CG21 123 aaPredicted RBP8.14□□□□□ -1.11
CDH1-205ENST00000562836 CNN1P51911 297 aaKnown RBP8.14□□□□□ -1.11
CDH1-205ENST00000562836 RND2P52198 227 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 TMEM78Q5T7P6 136 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 SFXN4Q6P4A7 337 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 LAS2Q8IYD9 372 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 LGALS14Q8TCE9 139 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 C15orf40Q8WUR7 153 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 CSAG2Q9Y5P2 127 aa8.14□□□□□ -1.11
CDH1-205ENST00000562836 NRAPQ86VF7 1730 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 CTDSPLO15194 276 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 PLPP2O43688 288 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 ACTL6BO94805 426 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 NUDT3O95989 172 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 CELP19835 753 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 DAP3P51398 398 aaKnown RBP8.13□□□□□ -1.11
CDH1-205ENST00000562836 GPM6AP51674 278 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 PLXDC2Q6UX71 529 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 ACOT4Q8N9L9 421 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 ZNF485Q8NCK3 441 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 OR51A4Q8NGJ6 313 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 OR10G6Q8NH81 332 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 SKA2Q8WVK7 121 aaPredicted RBP8.13□□□□□ -1.11
CDH1-205ENST00000562836 KCNK15Q9H427 330 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 ARL15Q9NXU5 204 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 ANXA10Q9UJ72 324 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 PLAGL1Q9UM63 463 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 P2RY1P47900 373 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 HMGCS2P54868 508 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 KRTDAPP60985 99 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 ZXDBP98169 803 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 MGAT2Q10469 447 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 UBE2NLQ5JXB2 153 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 FGFRL1Q8N441 504 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 CMTM2Q8TAZ6 248 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 BAALCQ8WXS3 180 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 LIN37Q96GY3 246 aaPredicted RBP8.13□□□□□ -1.11
CDH1-205ENST00000562836 NIPSNAP3BQ9BS92 247 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 CXCL16Q9H2A7 254 aa8.13□□□□□ -1.11
CDH1-205ENST00000562836 RPL36Q9Y3U8 105 aaKnown RBP8.13□□□□□ -1.11
CDH1-205ENST00000562836 PSMB11A5LHX3 300 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 OR7C1O76099 320 aaPredicted RBP8.12□□□□□ -1.11
CDH1-205ENST00000562836 SOX14O95416 240 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 PPP1R3DO95685 299 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 CYB5AP00167 134 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 APOC2P02655 101 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 MT-ATP8P03928 68 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 NGFRP08138 427 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 ZNF728P0DKX0 622 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 ATP6V0CP27449 155 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 PPIFP30405 207 aaKnown RBP8.12□□□□□ -1.11
CDH1-205ENST00000562836 TPPP2P59282 170 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 ROM1Q03395 351 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 RAB40BQ12829 278 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 QSER1Q2KHR3 1735 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 RPL7L1Q6DKI1 246 aaKnown RBP8.12□□□□□ -1.11
CDH1-205ENST00000562836 CALHM3Q86XJ0 350 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 APCDD1LQ8NCL9 501 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 PLPPR1Q8TBJ4 325 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 TWIST2Q8WVJ9 160 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 GRAMD2BQ96HH9 432 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 DNAJC30Q96LL9 226 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 LRRC3BQ96PB8 259 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 IMMP2LQ96T52 175 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 SDF2Q99470 211 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms