RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 TMEM123Q8N131 208 aa11.56□□□□□ -0.56
CLK3-206ENST00000562078 LRRC75AQ8NAA5 344 aa11.56□□□□□ -0.56
CLK3-206ENST00000562078 CLDND2Q8NHS1 167 aa11.56□□□□□ -0.56
CLK3-206ENST00000562078 GPR119Q8TDV5 335 aa11.56□□□□□ -0.56
CLK3-206ENST00000562078 THAP3Q8WTV1 239 aaPredicted RBP11.56□□□□□ -0.56
CLK3-206ENST00000562078 LIPHQ8WWY8 451 aa11.56□□□□□ -0.56
CLK3-206ENST00000562078 TP53RKQ96S44 253 aa11.56□□□□□ -0.56
CLK3-206ENST00000562078 OSGIN2Q9Y236 505 aa11.56□□□□□ -0.56
CLK3-206ENST00000562078 YLPM1P49750 1951 aaKnown RBP11.56□□□□□ -0.56
CLK3-206ENST00000562078 TRBV11-1A0A0K0K1C0 115 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 A0A1W2PQD3 144 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 MEGF11A6BM72 1044 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 AQP7O14520 342 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 SCRG1O75711 98 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 GZMHP20718 246 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 ATP6V0CP27449 155 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 FAM90A2PQ658T7 463 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 ACY3Q96HD9 319 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 REEP6Q96HR9 211 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 SCGB3A2Q96PL1 93 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 ST6GALNAC5Q9BVH7 336 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 B3GALT5Q9Y2C3 310 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 A0A0A6YYD4 124 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 PRR33A8MZF0 331 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 PPP5D1E7EU14 171 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 SOCS1O15524 211 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 IFNA21P01568 189 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 OR3A2P47893 321 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 IDH3GP51553 393 aaPredicted RBP11.55□□□□□ -0.56
CLK3-206ENST00000562078 RNF144BQ7Z419 303 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 ANKRD37Q7Z713 158 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 ZNF581Q9P0T4 197 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 GRHPRQ9UBQ7 328 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 SH3BGRL2Q9UJC5 107 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 FUT9Q9Y231 359 aa11.55□□□□□ -0.56
CLK3-206ENST00000562078 NSG1A0A0A6YYJ2 146 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 LOC101059948A0A1B0GTJ6 334 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 CBY3A6NI87 242 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 GP1BBP13224 206 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 AMY2BP19961 511 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 PGCP20142 388 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 EMP2P54851 167 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 TSPAN32Q96QS1 320 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 ANGPTL4Q9BY76 406 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 GSX1Q9H4S2 264 aaPredicted RBP11.54□□□□□ -0.56
CLK3-206ENST00000562078 EHFQ9NZC4 300 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 RNF150Q9ULK6 438 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 IGLV3-12A0A075B6K2 115 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 A0A1B0GUS0 222 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 LOC107986453A0A1B0GWG9 222 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 CBR3O75828 277 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 NDUFB8O95169 186 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 CATSPERDQ86XM0 798 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 LYG1Q8N1E2 194 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 ADPRHL1Q8NDY3 354 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 CALHM2Q9HA72 323 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 AURKAIP1Q9NWT8 199 aaPredicted RBP11.54□□□□□ -0.56
CLK3-206ENST00000562078 P4HTMQ9NXG6 502 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 RARRES3Q9UL19 164 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 EMC9Q9Y3B6 208 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 CACNA1HO95180 2353 aa11.54□□□□□ -0.56
CLK3-206ENST00000562078 A8MVM7 634 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 C11orf98E9PRG8 122 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 IGHEP01854 428 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 TMEM95Q3KNT9 176 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 RIPPLY2Q5TAB7 128 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 SP5Q6BEB4 398 aaPredicted RBP11.53□□□□□ -0.56
CLK3-206ENST00000562078 TMEM170AQ8WVE7 144 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 SLC35E1Q96K37 410 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 SPACA5Q96QH8 159 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 GPR35Q9HC97 309 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 PAM16Q9Y3D7 125 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 K7EP13 123 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 CIDEAO60543 219 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 BGLAPP02818 100 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 FBXW4P57775 412 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 SP6Q3SY56 376 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 GPR157Q5UAW9 335 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 TOMM20LQ6UXN7 152 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 EMG1Q92979 244 aaKnown RBP11.53□□□□□ -0.56
CLK3-206ENST00000562078 HHLA2Q9UM44 414 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 C14orf166Q9Y224 244 aaKnown RBP11.53□□□□□ -0.56
CLK3-206ENST00000562078 LRP12Q9Y561 859 aa11.53□□□□□ -0.56
CLK3-206ENST00000562078 TRAV36DV7A0A075B6V5 113 aa11.52□□□□□ -0.56
CLK3-206ENST00000562078 TMED7-TICAM2A0A0A6YYA0 188 aa11.52□□□□□ -0.56
CLK3-206ENST00000562078 FAM230AA0A1W2PPH8 454 aa11.52□□□□□ -0.56
CLK3-206ENST00000562078 C2orf72A6NCS6 295 aa11.52□□□□□ -0.56
CLK3-206ENST00000562078 HSPB2A8KAH6 182 aa11.52□□□□□ -0.56
CLK3-206ENST00000562078 NTN3O00634 580 aaPredicted RBP11.52□□□□□ -0.56
CLK3-206ENST00000562078 PFN1P07737 140 aaKnown RBP11.52□□□□□ -0.56
CLK3-206ENST00000562078 DBHP09172 617 aa11.52□□□□□ -0.56
CLK3-206ENST00000562078 ZNF43P17038 809 aa11.52□□□□□ -0.56
CLK3-206ENST00000562078 ACP1P24666 158 aa11.52□□□□□ -0.56
CLK3-206ENST00000562078 KLF3P57682 345 aaPredicted RBP11.52□□□□□ -0.56
CLK3-206ENST00000562078 FAM189A2Q15884 450 aa11.52□□□□□ -0.56
CLK3-206ENST00000562078 HSPB2Q16082 182 aa11.52□□□□□ -0.56
CLK3-206ENST00000562078 MPV17LQ2QL34 196 aa11.52□□□□□ -0.56
CLK3-206ENST00000562078 Q6ZVH6 145 aa11.52□□□□□ -0.56
CLK3-206ENST00000562078 CMTM1Q8IZ96 169 aa11.52□□□□□ -0.56
CLK3-206ENST00000562078 NFAM1Q8NET5 270 aaPredicted RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms