RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 NAAAQ02083 359 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 PSG7Q13046 419 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 SNTB1Q13884 538 aaKnown RBP8.35□□□□□ -1.07
SMG1-205ENST00000561947 Q6P435 159 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 RDH5Q92781 318 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 MSI2Q96DH6 328 aaKnown RBP8.35□□□□□ -1.07
SMG1-205ENST00000561947 CYTL1Q9NRR1 136 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 SESN1Q9Y6P5 492 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 LOC400499M0QZD8 3231 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 MBD3L4A6NDZ8 208 aaPredicted RBP8.34□□□□□ -1.07
SMG1-205ENST00000561947 MBD3L3A6NE82 208 aaPredicted RBP8.34□□□□□ -1.07
SMG1-205ENST00000561947 MBD3L5A6NJ08 208 aaPredicted RBP8.34□□□□□ -1.07
SMG1-205ENST00000561947 H7C1Q1 480 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 DEGS1O15121 323 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 TUSC2O75896 110 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 CGAP01215 116 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 MPV17P39210 176 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 KCNJ3P48549 501 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 ERVK11-1P61568 191 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 PAN3Q58A45 887 aaKnown RBP8.34□□□□□ -1.07
SMG1-205ENST00000561947 ZNF880Q6PDB4 577 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 Q6ZS92 163 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 HSD17B13Q7Z5P4 300 aaPredicted RBP8.34□□□□□ -1.07
SMG1-205ENST00000561947 CXorf67Q86X51 503 aaPredicted RBP8.34□□□□□ -1.07
SMG1-205ENST00000561947 FOXRED2Q8IWF2 684 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 LGI3Q8N145 548 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 ZNF610Q8N9Z0 462 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 MBD3L2Q8NHZ7 208 aaPredicted RBP8.34□□□□□ -1.07
SMG1-205ENST00000561947 LRRC20Q8TCA0 184 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 KLF14Q8TD94 323 aaPredicted RBP8.34□□□□□ -1.07
SMG1-205ENST00000561947 GLYATL2Q8WU03 294 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 STARD4Q96DR4 205 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 GTF3C1Q12789 2109 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 INTS1Q8N201 2190 aaKnown RBP8.34□□□□□ -1.07
SMG1-205ENST00000561947 IGKV1-6A0A0C4DH72 117 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 TMEM210A6NLX4 147 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 MPPED1O15442 326 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 PHF1O43189 567 aaPredicted RBP8.34□□□□□ -1.07
SMG1-205ENST00000561947 ZNF44P15621 663 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 GNRHRP30968 328 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 RND3P61587 244 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 ZNF154Q13106 437 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 SMCO1Q147U7 214 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 OR8G1Q15617 311 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 C20orf204Q6ZNR8 217 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 SEM1Q6ZVN7 128 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 LYZL2Q7Z4W2 148 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 LDLRAD3Q86YD5 345 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 OPN3Q9H1Y3 402 aaPredicted RBP8.34□□□□□ -1.07
SMG1-205ENST00000561947 OBP2BQ9NPH6 170 aa8.34□□□□□ -1.07
SMG1-205ENST00000561947 FBXO9Q9UK97 447 aaPredicted RBP8.34□□□□□ -1.07
SMG1-205ENST00000561947 DEDDO75618 318 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 FGF2P09038 288 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 CECR9P0C854 216 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 PGA5P0DJD9 388 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 HKR1P10072 659 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 MDH2P40926 338 aaKnown RBP8.33□□□□□ -1.08
SMG1-205ENST00000561947 HLA-DRB3P79483 266 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 P2RY6Q15077 328 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 BAP18Q8IXM2 172 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 ZNF565Q8N9K5 539 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 OR4A4PQ8NGN8 299 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 SECTM1Q8WVN6 248 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 TP53RKQ96S44 253 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 NRIP2Q9BQI9 281 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 SLC5A7Q9GZV3 580 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 BARX1Q9HBU1 254 aaPredicted RBP8.33□□□□□ -1.08
SMG1-205ENST00000561947 ZNF71Q9NQZ8 489 aaPredicted RBP8.33□□□□□ -1.08
SMG1-205ENST00000561947 C3orf85A0A1B0GTC6 90 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 A8MXK9 166 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 H0YL77 283 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 TEX46H3BTG2 121 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 GPR31O00270 319 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 CDIPTO14735 213 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 KLK10O43240 276 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 IGLV1-44P01699 117 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 GLI4P10075 376 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 ZP3P21754 424 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 TUBG1P23258 451 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 SRPXP78539 464 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 BHLHA15Q7RTS1 189 aaPredicted RBP8.33□□□□□ -1.08
SMG1-205ENST00000561947 EIF4E3Q8N5X7 224 aaKnown RBP8.33□□□□□ -1.08
SMG1-205ENST00000561947 BVESQ8NE79 360 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 LHFPL5Q8TAF8 219 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 TUBG2Q9NRH3 451 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 TMEM100Q9NV29 134 aa8.33□□□□□ -1.08
SMG1-205ENST00000561947 PURGQ9UJV8 347 aaKnown RBP8.33□□□□□ -1.08
SMG1-205ENST00000561947 LSM5Q9Y4Y9 91 aaKnown RBP8.33□□□□□ -1.08
SMG1-205ENST00000561947 SPENQ96T58 3664 aaKnown RBP8.33□□□□□ -1.08
SMG1-205ENST00000561947 ZNF292O60281 2723 aa8.32□□□□□ -1.08
SMG1-205ENST00000561947 IGKV1D-13A0A0B4J2D9 117 aa8.32□□□□□ -1.08
SMG1-205ENST00000561947 SIRPB1O00241 398 aa8.32□□□□□ -1.08
SMG1-205ENST00000561947 OR2H2O95918 312 aa8.32□□□□□ -1.08
SMG1-205ENST00000561947 SCGB1D2O95969 90 aa8.32□□□□□ -1.08
SMG1-205ENST00000561947 IGKV1-13P0DP09 117 aa8.32□□□□□ -1.08
SMG1-205ENST00000561947 SPIN3Q5JUX0 258 aa8.32□□□□□ -1.08
SMG1-205ENST00000561947 SHEQ5VZ18 495 aa8.32□□□□□ -1.08
SMG1-205ENST00000561947 PCSK4Q6UW60 755 aa8.32□□□□□ -1.08
SMG1-205ENST00000561947 ZNF818PQ6ZRF7 136 aa8.32□□□□□ -1.08
SMG1-205ENST00000561947 TBC1D26Q86UD7 250 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms