RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 PTGFRP43088 359 aa20.27■□□□□ 0.84
NME3-202ENST00000561637 DYNLT3P51808 116 aa20.27■□□□□ 0.84
NME3-202ENST00000561637 PAN3Q58A45 887 aaKnown RBP20.27■□□□□ 0.84
NME3-202ENST00000561637 ELP2Q6IA86 826 aa20.27■□□□□ 0.84
NME3-202ENST00000561637 CHST4Q8NCG5 386 aa20.27■□□□□ 0.84
NME3-202ENST00000561637 PXT1Q8NFP0 134 aa20.27■□□□□ 0.84
NME3-202ENST00000561637 OR13A1Q8NGR1 328 aa20.27■□□□□ 0.84
NME3-202ENST00000561637 MRAPQ8TCY5 172 aa20.27■□□□□ 0.84
NME3-202ENST00000561637 TMEM106AQ96A25 262 aa20.27■□□□□ 0.84
NME3-202ENST00000561637 RHOFQ9HBH0 211 aa20.27■□□□□ 0.84
NME3-202ENST00000561637 TAS2R3Q9NYW6 316 aa20.27■□□□□ 0.84
NME3-202ENST00000561637 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.27■□□□□ 0.84
NME3-202ENST00000561637 FAM90A22PA8MWA6 464 aa20.26■□□□□ 0.83
NME3-202ENST00000561637 OGG1O15527 345 aa20.26■□□□□ 0.83
NME3-202ENST00000561637 IGLV1-47P01700 117 aa20.26■□□□□ 0.83
NME3-202ENST00000561637 IGHV3-7P01780 117 aa20.26■□□□□ 0.83
NME3-202ENST00000561637 CD28P10747 220 aa20.26■□□□□ 0.83
NME3-202ENST00000561637 GLP1RP43220 463 aa20.26■□□□□ 0.83
NME3-202ENST00000561637 REC114Q7Z4M0 266 aa20.26■□□□□ 0.83
NME3-202ENST00000561637 ZNF485Q8NCK3 441 aa20.26■□□□□ 0.83
NME3-202ENST00000561637 OR51T1Q8NGJ9 327 aa20.26■□□□□ 0.83
NME3-202ENST00000561637 GGHQ92820 318 aa20.26■□□□□ 0.83
NME3-202ENST00000561637 LEAP2Q969E1 77 aa20.26■□□□□ 0.83
NME3-202ENST00000561637 BABAM2Q9NXR7 383 aa20.26■□□□□ 0.83
NME3-202ENST00000561637 HTR3BO95264 441 aa20.25■□□□□ 0.83
NME3-202ENST00000561637 CGB3P0DN86 165 aa20.25■□□□□ 0.83
NME3-202ENST00000561637 CGB7P0DN87 165 aa20.25■□□□□ 0.83
NME3-202ENST00000561637 BDH1Q02338 343 aa20.25■□□□□ 0.83
NME3-202ENST00000561637 CCDC58Q4VC31 144 aa20.25■□□□□ 0.83
NME3-202ENST00000561637 ASCL4Q6XD76 172 aa20.25■□□□□ 0.83
NME3-202ENST00000561637 TMPRSS11AQ6ZMR5 421 aa20.25■□□□□ 0.83
NME3-202ENST00000561637 SMIM19Q96E16 107 aa20.25■□□□□ 0.83
NME3-202ENST00000561637 DPM3Q9P2X0 92 aa20.25■□□□□ 0.83
NME3-202ENST00000561637 EXOSC1Q9Y3B2 195 aaKnown RBP20.25■□□□□ 0.83
NME3-202ENST00000561637 A0A1W2PP11 408 aa20.24■□□□□ 0.83
NME3-202ENST00000561637 FUOMA2VDF0 154 aa20.24■□□□□ 0.83
NME3-202ENST00000561637 SH2D7A6NKC9 451 aaPredicted RBP20.24■□□□□ 0.83
NME3-202ENST00000561637 NFYBP25208 207 aa20.24■□□□□ 0.83
NME3-202ENST00000561637 CD34P28906 385 aa20.24■□□□□ 0.83
NME3-202ENST00000561637 RPS11P62280 158 aaKnown RBP eCLIP20.24■□□□□ 0.83
NME3-202ENST00000561637 RSU1Q15404 277 aa20.24■□□□□ 0.83
NME3-202ENST00000561637 DDI2Q5TDH0 399 aa20.24■□□□□ 0.83
NME3-202ENST00000561637 DMKNQ6E0U4 476 aaPredicted RBP20.24■□□□□ 0.83
NME3-202ENST00000561637 DHRSXQ8N5I4 330 aa20.24■□□□□ 0.83
NME3-202ENST00000561637 WIPF2Q8TF74 440 aaPredicted RBP20.24■□□□□ 0.83
NME3-202ENST00000561637 GHSRQ92847 366 aa20.24■□□□□ 0.83
NME3-202ENST00000561637 KIRREL1Q96J84 757 aa20.24■□□□□ 0.83
NME3-202ENST00000561637 CYYR1Q96J86 154 aa20.24■□□□□ 0.83
NME3-202ENST00000561637 ING4Q9UNL4 249 aa20.24■□□□□ 0.83
NME3-202ENST00000561637 TRAV8-7A0A075B6U6 113 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 MEIKINA0A087WXM9 373 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 TRBV5-5A0A0J9YX44 114 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 PNMA8CA0A1B0GUJ8 204 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 XPNPEP2O43895 674 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 MYL12AP19105 171 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 RBM39Q14498 530 aaKnown RBP20.23■□□□□ 0.83
NME3-202ENST00000561637 IL13RA2Q14627 380 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 LTC4SQ16873 150 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 RSBN1Q5VWQ0 802 aaPredicted RBP20.23■□□□□ 0.83
NME3-202ENST00000561637 TTC23Q5W5X9 447 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 OR52W1Q6IF63 320 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 C11orf88Q6PI97 169 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 Q8NFD4 153 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 HAVCR2Q8TDQ0 301 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 TMEM80Q96HE8 168 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 PGLYRP3Q96LB9 341 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 PRSS22Q9GZN4 317 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 CALYQ9NYX4 217 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 PITPNC1Q9UKF7 332 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 COL7A1Q02388 2944 aa20.23■□□□□ 0.83
NME3-202ENST00000561637 KBTBD11-OT1A0A1B0GTJ5 212 aa20.22■□□□□ 0.83
NME3-202ENST00000561637 A0A1W2PPK0 400 aa20.22■□□□□ 0.83
NME3-202ENST00000561637 ZNF729A6NN14 1252 aaPredicted RBP20.22■□□□□ 0.83
NME3-202ENST00000561637 MAGEB3O15480 346 aa20.22■□□□□ 0.83
NME3-202ENST00000561637 CD2P06729 351 aa20.22■□□□□ 0.83
NME3-202ENST00000561637 LOXL3P58215 753 aa20.22■□□□□ 0.83
NME3-202ENST00000561637 ST3GAL4Q11206 333 aa20.22■□□□□ 0.83
NME3-202ENST00000561637 HLA-DRB5Q30154 266 aa20.22■□□□□ 0.83
NME3-202ENST00000561637 NSUN5P1Q3KNT7 163 aa20.22■□□□□ 0.83
NME3-202ENST00000561637 TPTE2P1Q5T6R2 138 aa20.22■□□□□ 0.83
NME3-202ENST00000561637 PACRGLQ8N7B6 248 aa20.22■□□□□ 0.83
NME3-202ENST00000561637 OR4D6Q8NGJ1 314 aa20.22■□□□□ 0.83
NME3-202ENST00000561637 OR52N1Q8NH53 320 aa20.22■□□□□ 0.83
NME3-202ENST00000561637 RFESDQ8TAC1 157 aa20.22■□□□□ 0.83
NME3-202ENST00000561637 MRGPRDQ8TDS7 321 aa20.22■□□□□ 0.83
NME3-202ENST00000561637 WNT10AQ9GZT5 417 aa20.22■□□□□ 0.83
NME3-202ENST00000561637 LY6LH3BQJ8 138 aa20.21■□□□□ 0.83
NME3-202ENST00000561637 FBXO24O75426 580 aa20.21■□□□□ 0.83
NME3-202ENST00000561637 ALDOBP05062 364 aa20.21■□□□□ 0.83
NME3-202ENST00000561637 IGFBP3P17936 291 aaPredicted RBP20.21■□□□□ 0.83
NME3-202ENST00000561637 OXLD1Q5BKU9 147 aa20.21■□□□□ 0.83
NME3-202ENST00000561637 RTN4RL2Q86UN3 420 aa20.21■□□□□ 0.83
NME3-202ENST00000561637 ZNF596Q8TC21 504 aa20.21■□□□□ 0.83
NME3-202ENST00000561637 TMEM138Q9NPI0 162 aa20.21■□□□□ 0.83
NME3-202ENST00000561637 OR6C3Q9NZP0 311 aa20.21■□□□□ 0.83
NME3-202ENST00000561637 A0A087X0M5 115 aa20.2■□□□□ 0.82
NME3-202ENST00000561637 A0A1B0GX30 115 aa20.2■□□□□ 0.82
NME3-202ENST00000561637 IRGMA1A4Y4 181 aa20.2■□□□□ 0.82
NME3-202ENST00000561637 ADARB2-AS1A8MUL3 147 aa20.2■□□□□ 0.82
NME3-202ENST00000561637 BUB1B-PAK6H3BSN5 160 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms