RNA–Protein interactions for RNA: ENST00000561415.1

IRF9-215, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 1,769 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-215ENST00000561415 OR4S1Q8NGB4 309 aa16.31■□□□□ 0.2
IRF9-215ENST00000561415 PLPPR1Q8TBJ4 325 aa16.31■□□□□ 0.2
IRF9-215ENST00000561415 DEDD2Q8WXF8 326 aa16.31■□□□□ 0.2
IRF9-215ENST00000561415 SNAPC3Q92966 411 aa16.31■□□□□ 0.2
IRF9-215ENST00000561415 SNX22Q96L94 193 aa16.31■□□□□ 0.2
IRF9-215ENST00000561415 GAFA1Q96PS6 74 aa16.31■□□□□ 0.2
IRF9-215ENST00000561415 ZNF665Q9H7R5 613 aa16.31■□□□□ 0.2
IRF9-215ENST00000561415 ZNF230Q9UIE0 474 aaPredicted RBP16.31■□□□□ 0.2
IRF9-215ENST00000561415 K7N7A8 449 aa16.3■□□□□ 0.2
IRF9-215ENST00000561415 PAX5Q02548 391 aa16.3■□□□□ 0.2
IRF9-215ENST00000561415 ZNF787Q6DD87 383 aa16.3■□□□□ 0.2
IRF9-215ENST00000561415 POC5Q8NA72 575 aa16.3■□□□□ 0.2
IRF9-215ENST00000561415 TMEM229BQ8NBD8 167 aa16.3■□□□□ 0.2
IRF9-215ENST00000561415 ZNRF1Q8ND25 227 aa16.3■□□□□ 0.2
IRF9-215ENST00000561415 PPP1R35Q8TAP8 253 aa16.3■□□□□ 0.2
IRF9-215ENST00000561415 MARVELD3Q96A59 401 aa16.3■□□□□ 0.2
IRF9-215ENST00000561415 COX4I2Q96KJ9 171 aa16.3■□□□□ 0.2
IRF9-215ENST00000561415 CCL13Q99616 98 aa16.3■□□□□ 0.2
IRF9-215ENST00000561415 LIME1Q9H400 295 aa16.3■□□□□ 0.2
IRF9-215ENST00000561415 TRBV6-6A0A0A6YYG2 114 aa16.29■□□□□ 0.2
IRF9-215ENST00000561415 NKX6-3A6NJ46 265 aa16.29■□□□□ 0.2
IRF9-215ENST00000561415 TNFRSF13BO14836 293 aaPredicted RBP16.29■□□□□ 0.2
IRF9-215ENST00000561415 SIGLEC5O15389 551 aa16.29■□□□□ 0.2
IRF9-215ENST00000561415 IGHV2-70P01814 119 aa16.29■□□□□ 0.2
IRF9-215ENST00000561415 TAS2R19P59542 299 aa16.29■□□□□ 0.2
IRF9-215ENST00000561415 GRK1Q15835 563 aa16.29■□□□□ 0.2
IRF9-215ENST00000561415 RGS21Q2M5E4 152 aa16.29■□□□□ 0.2
IRF9-215ENST00000561415 OR52W1Q6IF63 320 aa16.29■□□□□ 0.2
IRF9-215ENST00000561415 MRPL30Q8TCC3 161 aaKnown RBP16.29■□□□□ 0.2
IRF9-215ENST00000561415 ST6GALNAC5Q9BVH7 336 aa16.29■□□□□ 0.2
IRF9-215ENST00000561415 C11orf54Q9H0W9 315 aaPredicted RBP16.29■□□□□ 0.2
IRF9-215ENST00000561415 CHMP1AQ9HD42 196 aaPredicted RBP16.29■□□□□ 0.2
IRF9-215ENST00000561415 MYOZ1Q9NP98 299 aaPredicted RBP16.29■□□□□ 0.2
IRF9-215ENST00000561415 EDARQ9UNE0 448 aa16.29■□□□□ 0.2
IRF9-215ENST00000561415 ABCA12Q86UK0 2595 aa16.29■□□□□ 0.2
IRF9-215ENST00000561415 POM121CA8CG34 1229 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 ZNF736B4DX44 427 aaPredicted RBP16.28■□□□□ 0.2
IRF9-215ENST00000561415 H7C1Q1 480 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 LYRM1O43325 122 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 NDUFA2O43678 99 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 TK1P04183 234 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 TMEM33P57088 247 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 IL13RA1P78552 427 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 RSBN1Q5VWQ0 802 aaPredicted RBP16.28■□□□□ 0.2
IRF9-215ENST00000561415 FAM216BQ8N7L0 139 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 BEST4Q8NFU0 473 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 COQ2Q96H96 371 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 TMEM246Q9BRR3 403 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 FAM234AQ9H0X4 552 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 NBPF19A0A087WUL8 3843 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 A0A1B0GW55 424 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 MGST3O14880 152 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 TMPRSS2O15393 492 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 IGHV4-39P01824 125 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 CD3DP04234 171 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 DUX4L2P0CJ85 424 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 DUX4L3P0CJ86 424 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 DUX4L4P0CJ87 422 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 DUX4L5P0CJ88 424 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 DUX4L6P0CJ89 424 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 DUX4L7P0CJ90 424 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 SELLP14151 372 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 HLA-DMAP28067 261 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 SRSF7Q16629 238 aaKnown RBP eCLIP16.28■□□□□ 0.2
IRF9-215ENST00000561415 SLC35E4Q6ICL7 350 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 DUX4L9Q6RFH8 374 aaPredicted RBP16.28■□□□□ 0.2
IRF9-215ENST00000561415 MAFIPQ8WZ33 124 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 NRGNQ92686 78 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 TIMD4Q96H15 378 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 MED30Q96HR3 178 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 C7orf50Q9BRJ6 194 aaKnown RBP16.28■□□□□ 0.2
IRF9-215ENST00000561415 KAAG1Q9UBP8 84 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 DUX4Q9UBX2 424 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 ARID1AO14497 2285 aa16.28■□□□□ 0.2
IRF9-215ENST00000561415 TMEM30CPA0ZSE6 113 aa16.27■□□□□ 0.2
IRF9-215ENST00000561415 MT-ND4P03905 459 aa16.27■□□□□ 0.2
IRF9-215ENST00000561415 CD74P04233 296 aa16.27■□□□□ 0.2
IRF9-215ENST00000561415 AKAIN1P0CW23 69 aa16.27■□□□□ 0.2
IRF9-215ENST00000561415 TBPP20226 339 aa16.27■□□□□ 0.2
IRF9-215ENST00000561415 AESQ08117 197 aa16.27■□□□□ 0.2
IRF9-215ENST00000561415 STEAP1BQ6NZ63 245 aa16.27■□□□□ 0.2
IRF9-215ENST00000561415 ZNF880Q6PDB4 577 aa16.27■□□□□ 0.2
IRF9-215ENST00000561415 Q6ZS49 121 aa16.27■□□□□ 0.2
IRF9-215ENST00000561415 SLC36A1Q7Z2H8 476 aa16.27■□□□□ 0.2
IRF9-215ENST00000561415 MUC20Q8N307 709 aaPredicted RBP16.27■□□□□ 0.2
IRF9-215ENST00000561415 OR5D13Q8NGL4 314 aa16.27■□□□□ 0.2
IRF9-215ENST00000561415 RAB1CQ92928 201 aa16.27■□□□□ 0.2
IRF9-215ENST00000561415 HRASLSQ9HDD0 168 aa16.27■□□□□ 0.2
IRF9-215ENST00000561415 Q9N2K0 584 aa16.27■□□□□ 0.2
IRF9-215ENST00000561415 ING3Q9NXR8 418 aa16.27■□□□□ 0.2
IRF9-215ENST00000561415 CSMD2Q7Z408 3487 aa16.27■□□□□ 0.19
IRF9-215ENST00000561415 APCP25054 2843 aa16.26■□□□□ 0.19
IRF9-215ENST00000561415 IGKV1D-8A0A087WSZ0 117 aa16.26■□□□□ 0.19
IRF9-215ENST00000561415 CENPXA8MT69 81 aa16.26■□□□□ 0.19
IRF9-215ENST00000561415 PPIHO43447 177 aaKnown RBP16.26■□□□□ 0.19
IRF9-215ENST00000561415 PTTG1O95997 202 aa16.26■□□□□ 0.19
IRF9-215ENST00000561415 FAUP35544 74 aaKnown RBP16.26■□□□□ 0.19
IRF9-215ENST00000561415 KRBOX4Q5JUW0 171 aa16.26■□□□□ 0.19
IRF9-215ENST00000561415 TMEM185AQ8NFB2 350 aa16.26■□□□□ 0.19
IRF9-215ENST00000561415 OR4C16Q8NGL9 310 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms