RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 VAPAQ9P0L0 249 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 SLC23A2Q9UGH3 650 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 CCL26Q9Y258 94 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 URGCP-MRPS24S4R325 110 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 FCGBPQ9Y6R7 5405 aaPredicted RBP1.51□□□□□ -2.17
USP8-218ENST00000561330 MYO9BQ13459 2157 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 TRAV8-3A0A0A6YYJ7 113 aa1.5□□□□□ -2.17
USP8-218ENST00000561330 H3BP45 60 aa1.5□□□□□ -2.17
USP8-218ENST00000561330 LECT2O14960 151 aa1.5□□□□□ -2.17
USP8-218ENST00000561330 SNAI1O95863 264 aaPredicted RBP1.5□□□□□ -2.17
USP8-218ENST00000561330 CD8AP01732 235 aa1.5□□□□□ -2.17
USP8-218ENST00000561330 SFTPCP11686 197 aa1.5□□□□□ -2.17
USP8-218ENST00000561330 ZNF140P52738 457 aaPredicted RBP1.5□□□□□ -2.17
USP8-218ENST00000561330 FAM184AQ8NB25 1140 aa1.5□□□□□ -2.17
USP8-218ENST00000561330 OR6N2Q8NGY6 317 aa1.5□□□□□ -2.17
USP8-218ENST00000561330 CASTOR1Q8WTX7 329 aa1.5□□□□□ -2.17
USP8-218ENST00000561330 B9D2Q9BPU9 175 aa1.5□□□□□ -2.17
USP8-218ENST00000561330 ANKHQ9HCJ1 492 aa1.5□□□□□ -2.17
USP8-218ENST00000561330 RPRD1BQ9NQG5 326 aaKnown RBP1.5□□□□□ -2.17
USP8-218ENST00000561330 RPUSD1Q9UJJ7 312 aaKnown RBP1.5□□□□□ -2.17
USP8-218ENST00000561330 DOCK6Q96HP0 2047 aa1.5□□□□□ -2.17
USP8-218ENST00000561330 TCF21O43680 179 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 C2orf80Q0P641 193 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 STX4Q12846 297 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 MMDQ15546 238 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 CEACAM21Q3KPI0 293 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 RESP18Q5W5W9 173 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 ELP2Q6IA86 826 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 Q6ZRU5 148 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 OR4A15Q8NGL6 344 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 OR4A5Q8NH83 315 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 GPR119Q8TDV5 335 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 NELFBQ8WX92 580 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 REEP6Q96HR9 211 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 MAP1LC3CQ9BXW4 147 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 AICDAQ9GZX7 198 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 GAL3ST2Q9H3Q3 398 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 VCX3AQ9NNX9 186 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 KCNIP2Q9NS61 270 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 TAS2R9Q9NYW1 312 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 LINC00588Q9Y4M8 146 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 PHLDA3Q9Y5J5 127 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 NUP205Q92621 2012 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 ATRNO75882 1429 aa1.49□□□□□ -2.17
USP8-218ENST00000561330 KMT2EQ8IZD2 1858 aa1.48□□□□□ -2.17
USP8-218ENST00000561330 KNCNA6PVL3 124 aa1.48□□□□□ -2.17
USP8-218ENST00000561330 ENSAO43768 121 aaKnown RBP1.48□□□□□ -2.17
USP8-218ENST00000561330 SPOPO43791 374 aa1.48□□□□□ -2.17
USP8-218ENST00000561330 SLC2A1P11166 492 aa1.48□□□□□ -2.17
USP8-218ENST00000561330 CRABP1P29762 137 aa1.48□□□□□ -2.17
USP8-218ENST00000561330 BLVRBP30043 206 aaPredicted RBP1.48□□□□□ -2.17
USP8-218ENST00000561330 EVI2BP34910 448 aa1.48□□□□□ -2.17
USP8-218ENST00000561330 GCLMP48507 274 aa1.48□□□□□ -2.17
USP8-218ENST00000561330 DSTNP60981 165 aa1.48□□□□□ -2.17
USP8-218ENST00000561330 STK38Q15208 465 aa1.48□□□□□ -2.17
USP8-218ENST00000561330 SLC25A25Q6KCM7 469 aa1.48□□□□□ -2.17
USP8-218ENST00000561330 C10orf107Q8IVU9 208 aa1.48□□□□□ -2.17
USP8-218ENST00000561330 OR11G2Q8NGC1 345 aa1.48□□□□□ -2.17
USP8-218ENST00000561330 OR10P1Q8NGE3 313 aa1.48□□□□□ -2.17
USP8-218ENST00000561330 OR6K2Q8NGY2 324 aa1.48□□□□□ -2.17
USP8-218ENST00000561330 APOL4Q9BPW4 351 aa1.48□□□□□ -2.17
USP8-218ENST00000561330 IGHV2-26A0A0B4J1V2 119 aa1.47□□□□□ -2.17
USP8-218ENST00000561330 A0A1W2PRG6 482 aa1.47□□□□□ -2.17
USP8-218ENST00000561330 ERICH4A6NGS2 130 aa1.47□□□□□ -2.17
USP8-218ENST00000561330 RFXANKO14593 260 aa1.47□□□□□ -2.17
USP8-218ENST00000561330 KDELR3O43731 214 aa1.47□□□□□ -2.17
USP8-218ENST00000561330 SLC25A20O43772 301 aa1.47□□□□□ -2.17
USP8-218ENST00000561330 SOX14O95416 240 aa1.47□□□□□ -2.17
USP8-218ENST00000561330 TTPAP49638 278 aa1.47□□□□□ -2.17
USP8-218ENST00000561330 RAB38P57729 211 aa1.47□□□□□ -2.17
USP8-218ENST00000561330 APOFQ13790 326 aa1.47□□□□□ -2.17
USP8-218ENST00000561330 GUSBP1Q15486 140 aa1.47□□□□□ -2.17
USP8-218ENST00000561330 OR4C16Q8NGL9 310 aa1.47□□□□□ -2.17
USP8-218ENST00000561330 ZNF396Q96N95 335 aaPredicted RBP1.47□□□□□ -2.17
USP8-218ENST00000561330 BIRC8Q96P09 236 aa1.47□□□□□ -2.17
USP8-218ENST00000561330 SYT4Q9H2B2 425 aa1.47□□□□□ -2.17
USP8-218ENST00000561330 TDRD3Q9H7E2 651 aaKnown RBP1.47□□□□□ -2.17
USP8-218ENST00000561330 TMEM131Q92545 1883 aa1.47□□□□□ -2.17
USP8-218ENST00000561330 ADGRB3O60242 1522 aa1.46□□□□□ -2.18
USP8-218ENST00000561330 ARGFXA6NJG6 315 aa1.46□□□□□ -2.18
USP8-218ENST00000561330 PLTPP55058 493 aa1.46□□□□□ -2.18
USP8-218ENST00000561330 PRDX4Q13162 271 aa1.46□□□□□ -2.18
USP8-218ENST00000561330 KRTCAP2Q8N6L1 136 aa1.46□□□□□ -2.18
USP8-218ENST00000561330 KCTD4Q8WVF5 259 aa1.46□□□□□ -2.18
USP8-218ENST00000561330 DDIT4LQ96D03 193 aa1.46□□□□□ -2.18
USP8-218ENST00000561330 DNAJC30Q96LL9 226 aa1.46□□□□□ -2.18
USP8-218ENST00000561330 COPS4Q9BT78 406 aa1.46□□□□□ -2.18
USP8-218ENST00000561330 BCL2L14Q9BZR8 327 aa1.46□□□□□ -2.18
USP8-218ENST00000561330 CXCL16Q9H2A7 254 aa1.46□□□□□ -2.18
USP8-218ENST00000561330 CRLF2Q9HC73 371 aa1.46□□□□□ -2.18
USP8-218ENST00000561330 POMPQ9Y244 141 aa1.46□□□□□ -2.18
USP8-218ENST00000561330 BTRCQ9Y297 605 aa1.46□□□□□ -2.18
USP8-218ENST00000561330 MIA3Q5JRA6 1907 aa1.45□□□□□ -2.18
USP8-218ENST00000561330 C19orf71A6NCJ1 209 aa1.45□□□□□ -2.18
USP8-218ENST00000561330 ODF3BA8MYP8 253 aa1.45□□□□□ -2.18
USP8-218ENST00000561330 RAB36O95755 333 aa1.45□□□□□ -2.18
USP8-218ENST00000561330 CPN2P22792 545 aa1.45□□□□□ -2.18
USP8-218ENST00000561330 ZIC4Q8N9L1 334 aa1.45□□□□□ -2.18
USP8-218ENST00000561330 OR8G5Q8NG78 346 aa1.45□□□□□ -2.18
USP8-218ENST00000561330 CDKL2Q92772 493 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms