RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PMS2P11Q13670 270 aa14.26□□□□□ -0.13
TPM1-228ENST00000560975 SNAI3Q3KNW1 292 aa14.26□□□□□ -0.13
TPM1-228ENST00000560975 TMEM222Q9H0R3 208 aa14.26□□□□□ -0.13
TPM1-228ENST00000560975 RPRMQ9NS64 109 aa14.26□□□□□ -0.13
TPM1-228ENST00000560975 PPYP01298 95 aa14.26□□□□□ -0.13
TPM1-228ENST00000560975 ZNF41P51814 821 aaPredicted RBP14.26□□□□□ -0.13
TPM1-228ENST00000560975 CLDN17P56750 224 aa14.26□□□□□ -0.13
TPM1-228ENST00000560975 TAS2R30P59541 319 aa14.26□□□□□ -0.13
TPM1-228ENST00000560975 TMEM267Q0VDI3 215 aaPredicted RBP14.26□□□□□ -0.13
TPM1-228ENST00000560975 C16orf82Q7Z2V1 217 aa14.26□□□□□ -0.13
TPM1-228ENST00000560975 HS3ST3A1Q9Y663 406 aa14.26□□□□□ -0.13
TPM1-228ENST00000560975 KIAA2026Q5HYC2 2103 aa14.26□□□□□ -0.13
TPM1-228ENST00000560975 GUCA1AP43080 201 aaPredicted RBP14.25□□□□□ -0.13
TPM1-228ENST00000560975 C1orf53Q5VUE5 145 aa14.25□□□□□ -0.13
TPM1-228ENST00000560975 Q6ZPA2 131 aa14.25□□□□□ -0.13
TPM1-228ENST00000560975 LRP11Q86VZ4 500 aa14.25□□□□□ -0.13
TPM1-228ENST00000560975 MRPL41Q8IXM3 137 aaKnown RBP14.25□□□□□ -0.13
TPM1-228ENST00000560975 SELENOHQ8IZQ5 122 aaKnown RBP14.25□□□□□ -0.13
TPM1-228ENST00000560975 ATP5SQ99766 215 aa14.25□□□□□ -0.13
TPM1-228ENST00000560975 SRD5A3Q9H8P0 318 aa14.25□□□□□ -0.13
TPM1-228ENST00000560975 TMEM242Q9NWH2 141 aa14.25□□□□□ -0.13
TPM1-228ENST00000560975 PLA2G5P39877 138 aa14.25□□□□□ -0.13
TPM1-228ENST00000560975 IDH3GP51553 393 aaPredicted RBP14.25□□□□□ -0.13
TPM1-228ENST00000560975 PRSS8Q16651 343 aa14.25□□□□□ -0.13
TPM1-228ENST00000560975 SSX7Q7RTT5 188 aa14.25□□□□□ -0.13
TPM1-228ENST00000560975 SDK1Q7Z5N4 2213 aa14.25□□□□□ -0.13
TPM1-228ENST00000560975 IGHV4-34P06331 123 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 GZMHP20718 246 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 PAX5Q02548 391 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 RSPO1Q2MKA7 263 aaPredicted RBP14.24□□□□□ -0.13
TPM1-228ENST00000560975 SPIN2AQ99865 258 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 SPIN2BQ9BPZ2 258 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 ZNF442Q9H7R0 627 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 CISD1Q9NZ45 108 aaKnown RBP14.24□□□□□ -0.13
TPM1-228ENST00000560975 CHD3Q12873 2000 aaKnown RBP14.24□□□□□ -0.13
TPM1-228ENST00000560975 M0R135 149 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 IGLV3-1P01715 115 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 HNF4GQ14541 408 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 TEX38Q6PEX7 206 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 POC1BQ8TC44 478 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 ZNF799Q96GE5 643 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 ELOVL1Q9BW60 279 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 SLC7A10Q9NS82 523 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 UNC13CQ8NB66 2214 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 ARL4DP49703 201 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 RPS18P62269 152 aaKnown RBP14.24□□□□□ -0.13
TPM1-228ENST00000560975 FBRSQ9HAH7 460 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 PLEK2Q9NYT0 353 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 ST3GAL6Q9Y274 331 aa14.24□□□□□ -0.13
TPM1-228ENST00000560975 A0A0U1RQV5 110 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 GCGP01275 180 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 IFNA5P01569 189 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 RTP5Q14D33 572 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 PHYHD1Q5SRE7 291 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 OR5L2Q8NGL0 311 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 OR10G4Q8NGN3 311 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 SIGLEC12Q96PQ1 595 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 PCGF1Q9BSM1 259 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 P4HTMQ9NXG6 502 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 FUT9Q9Y231 359 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 ARHGAP21Q5T5U3 1957 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 IGKV1-12A0A0C4DH73 117 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 A0A1W2PPQ1 181 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 SCGB1D1O95968 90 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 IGKV1D-12P01611 117 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 MBP02144 154 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 ZNF726P1Q15940 193 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 IZUMO4Q1ZYL8 232 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.23□□□□□ -0.13
TPM1-228ENST00000560975 NCR3LG1Q68D85 454 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 ABLIM2Q6H8Q1 611 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 H1FOOQ8IZA3 346 aaPredicted RBP14.23□□□□□ -0.13
TPM1-228ENST00000560975 GJC3Q8NFK1 279 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 OR1L3Q8NH93 324 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 SMIM7Q9BQ49 75 aa14.23□□□□□ -0.13
TPM1-228ENST00000560975 RBM24Q9BX46 236 aaKnown RBP14.23□□□□□ -0.13
TPM1-228ENST00000560975 PPP5D1E7EU14 171 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 H3BMH7 237 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 TK1P04183 234 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 CEACAM1P13688 526 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 MSR1P21757 451 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 UCP3P55916 312 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 FAM185AQ8N0U4 392 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 GAPTQ8N292 157 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 BADQ92934 168 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 BORCS8Q96FH0 119 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 TPSD1Q9BZJ3 242 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 WNT16Q9UBV4 365 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 WDR87Q6ZQQ6 2873 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 M0R143 59 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 SFTPCP11686 197 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 PAX9P55771 341 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 ZNF818PQ6ZRF7 136 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 LMX1AQ8TE12 382 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 RPUSD4Q96CM3 377 aaKnown RBP14.22□□□□□ -0.13
TPM1-228ENST00000560975 ADGRG7Q96K78 797 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 RBKSQ9H477 322 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 IL17BQ9UHF5 180 aa14.22□□□□□ -0.13
TPM1-228ENST00000560975 A6NNC1 897 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 OR7C1O76099 320 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms