RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 POU3F4P49335 361 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 AESQ08117 197 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 FOXE3Q13461 319 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 UBE2V2Q15819 145 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 ADAMTSL5Q6ZMM2 481 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 ADI1Q9BV57 179 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 ING3Q9NXR8 418 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 MRM2Q9UI43 246 aaKnown RBP13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 ODAMA1E959 279 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 ZNF729A6NN14 1252 aaPredicted RBP13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 NCBP2LA6PVI3 153 aaKnown RBP13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 CCRL2O00421 344 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 SYT7O43581 403 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 MITFO75030 526 aaPredicted RBP13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 ENTPD6O75354 484 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 FRMD6-AS1P0C7T7 363 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 EPHA2P29317 976 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 HTR1FP30939 366 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 NPBWR2P48146 333 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 RAB7AP51149 207 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 ATP1B3P54709 279 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 MADCAM1Q13477 382 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 ODF4Q2M2E3 257 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 KRBOX4Q5JUW0 171 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 BCDIN3DQ7Z5W3 292 aaKnown RBP13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 OR8H3Q8N146 312 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 C4orf3Q8WVX3 66 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 C10orf35Q96D05 121 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 RNFT2Q96EX2 444 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 GSTK1Q9Y2Q3 226 aa13.96□□□□□ -0.17
TSPAN3-208ENST00000560514 H3BSH0 61 aa13.95□□□□□ -0.18
TSPAN3-208ENST00000560514 OR2H2O95918 312 aa13.95□□□□□ -0.18
TSPAN3-208ENST00000560514 KRT8P05787 483 aa13.95□□□□□ -0.18
TSPAN3-208ENST00000560514 RBP2P50120 134 aa13.95□□□□□ -0.18
TSPAN3-208ENST00000560514 SCN1BQ07699 218 aa13.95□□□□□ -0.18
TSPAN3-208ENST00000560514 PLEKHG7Q6ZR37 379 aa13.95□□□□□ -0.18
TSPAN3-208ENST00000560514 OR11H1Q8NG94 326 aa13.95□□□□□ -0.18
TSPAN3-208ENST00000560514 OR8J1Q8NGP2 316 aa13.95□□□□□ -0.18
TSPAN3-208ENST00000560514 TRUB1Q8WWH5 349 aaKnown RBP13.95□□□□□ -0.18
TSPAN3-208ENST00000560514 IL4I1Q96RQ9 567 aa13.95□□□□□ -0.18
TSPAN3-208ENST00000560514 OR6C3Q9NZP0 311 aa13.95□□□□□ -0.18
TSPAN3-208ENST00000560514 A0A1W2PPI3 338 aa13.94□□□□□ -0.18
TSPAN3-208ENST00000560514 METTL15A6NJ78 407 aa13.94□□□□□ -0.18
TSPAN3-208ENST00000560514 LINC01548A6NM66 108 aa13.94□□□□□ -0.18
TSPAN3-208ENST00000560514 J3QR06 171 aa13.94□□□□□ -0.18
TSPAN3-208ENST00000560514 JTBO76095 146 aa13.94□□□□□ -0.18
TSPAN3-208ENST00000560514 OR8U8P0C7N1 319 aa13.94□□□□□ -0.18
TSPAN3-208ENST00000560514 ZNF44P15621 663 aa13.94□□□□□ -0.18
TSPAN3-208ENST00000560514 GPR12P47775 334 aa13.94□□□□□ -0.18
TSPAN3-208ENST00000560514 ZNF429Q86V71 674 aa13.94□□□□□ -0.18
TSPAN3-208ENST00000560514 HAVCR2Q8TDQ0 301 aa13.94□□□□□ -0.18
TSPAN3-208ENST00000560514 RFKQ969G6 155 aa13.94□□□□□ -0.18
TSPAN3-208ENST00000560514 CENPNQ96H22 339 aaPredicted RBP13.94□□□□□ -0.18
TSPAN3-208ENST00000560514 CHST5Q9GZS9 411 aa13.94□□□□□ -0.18
TSPAN3-208ENST00000560514 MAGEB4O15481 346 aaPredicted RBP13.93□□□□□ -0.18
TSPAN3-208ENST00000560514 RPP14O95059 124 aaKnown RBP13.93□□□□□ -0.18
TSPAN3-208ENST00000560514 VDAC1P21796 283 aa13.93□□□□□ -0.18
TSPAN3-208ENST00000560514 FHL3Q13643 280 aa13.93□□□□□ -0.18
TSPAN3-208ENST00000560514 C1orf146Q5VVC0 180 aa13.93□□□□□ -0.18
TSPAN3-208ENST00000560514 KCTD20Q7Z5Y7 419 aa13.93□□□□□ -0.18
TSPAN3-208ENST00000560514 AMIGO2Q86SJ2 522 aa13.93□□□□□ -0.18
TSPAN3-208ENST00000560514 CATSPERDQ86XM0 798 aa13.93□□□□□ -0.18
TSPAN3-208ENST00000560514 TGIF2LXQ8IUE1 241 aa13.93□□□□□ -0.18
TSPAN3-208ENST00000560514 YIPF7Q8N8F6 280 aa13.93□□□□□ -0.18
TSPAN3-208ENST00000560514 ZNF565Q8N9K5 539 aa13.93□□□□□ -0.18
TSPAN3-208ENST00000560514 GABARAPL3Q9BY60 117 aa13.93□□□□□ -0.18
TSPAN3-208ENST00000560514 ABCG5Q9H222 651 aa13.93□□□□□ -0.18
TSPAN3-208ENST00000560514 LIN7CQ9NUP9 197 aaKnown RBP13.93□□□□□ -0.18
TSPAN3-208ENST00000560514 KBTBD11-OT1A0A1B0GTJ5 212 aa13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 A0A1W2PQL4 384 aaPredicted RBP13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 MPZL2O60487 215 aa13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 IGHV3-7P01780 117 aa13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 OCM2P0CE71 109 aa13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 OCMP0CE72 109 aaPredicted RBP13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 ATP6V1E1P36543 226 aa13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 MTCP1P56278 107 aa13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 C17orf58Q2M2W7 97 aa13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 MOB3BQ86TA1 216 aa13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 RNF152Q8N8N0 203 aa13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 DNAAF1Q8NEP3 725 aa13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 OR10X1Q8NGY0 326 aa13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 KIRREL1Q96J84 757 aa13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 CIB1Q99828 191 aa13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 HMG20AQ9NP66 347 aa13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 ISYNA1Q9NPH2 558 aa13.92□□□□□ -0.18
TSPAN3-208ENST00000560514 CSN2P05814 226 aa13.91□□□□□ -0.18
TSPAN3-208ENST00000560514 HCKP08631 526 aa13.91□□□□□ -0.18
TSPAN3-208ENST00000560514 GLP1RP43220 463 aa13.91□□□□□ -0.18
TSPAN3-208ENST00000560514 GNG10P50151 68 aa13.91□□□□□ -0.18
TSPAN3-208ENST00000560514 DIAPH2-AS1Q14236 149 aa13.91□□□□□ -0.18
TSPAN3-208ENST00000560514 ATXN7L3Q14CW9 347 aaPredicted RBP13.91□□□□□ -0.18
TSPAN3-208ENST00000560514 SLC25A30Q5SVS4 291 aa13.91□□□□□ -0.18
TSPAN3-208ENST00000560514 UTF1Q5T230 341 aa13.91□□□□□ -0.18
TSPAN3-208ENST00000560514 CHST4Q8NCG5 386 aa13.91□□□□□ -0.18
TSPAN3-208ENST00000560514 OR1N2Q8NGR9 330 aa13.91□□□□□ -0.18
TSPAN3-208ENST00000560514 PP6455Q8WZ26 134 aa13.91□□□□□ -0.18
TSPAN3-208ENST00000560514 LEAP2Q969E1 77 aa13.91□□□□□ -0.18
TSPAN3-208ENST00000560514 RASL11BQ9BPW5 248 aa13.91□□□□□ -0.18
TSPAN3-208ENST00000560514 KRTAP17-1Q9BYP8 105 aa13.91□□□□□ -0.18
TSPAN3-208ENST00000560514 CHCHD3Q9NX63 227 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms