RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 EXOSC2Q13868 293 aaKnown RBP15.13■□□□□ 0.01
SNX1-208ENST00000559844 C11orf87Q6NUJ2 197 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 SEC22AQ96IW7 307 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 NMES1Q9C002 83 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 MFFQ9GZY8 342 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 POLDIP2Q9Y2S7 368 aa15.13■□□□□ 0.01
SNX1-208ENST00000559844 F8VVB4 439 aa15.12■□□□□ 0.01
SNX1-208ENST00000559844 F8VWA3 439 aa15.12■□□□□ 0.01
SNX1-208ENST00000559844 SERPINF1P36955 418 aa15.12■□□□□ 0.01
SNX1-208ENST00000559844 TFF3Q07654 80 aa15.12■□□□□ 0.01
SNX1-208ENST00000559844 ZNF546Q86UE3 836 aa15.12■□□□□ 0.01
SNX1-208ENST00000559844 SGPP2Q8IWX5 399 aa15.12■□□□□ 0.01
SNX1-208ENST00000559844 Q8IYB0 196 aa15.12■□□□□ 0.01
SNX1-208ENST00000559844 C1orf174Q8IYL3 243 aa15.12■□□□□ 0.01
SNX1-208ENST00000559844 FAM58AQ8N1B3 248 aa15.12■□□□□ 0.01
SNX1-208ENST00000559844 FAM169BQ8N8A8 192 aa15.12■□□□□ 0.01
SNX1-208ENST00000559844 PPP1R1CQ8WVI7 109 aa15.12■□□□□ 0.01
SNX1-208ENST00000559844 GTF3AQ92664 365 aaKnown RBP15.12■□□□□ 0.01
SNX1-208ENST00000559844 S100PBPQ96BU1 408 aa15.12■□□□□ 0.01
SNX1-208ENST00000559844 RIMS4Q9H426 269 aaPredicted RBP15.12■□□□□ 0.01
SNX1-208ENST00000559844 LRRK2Q5S007 2527 aa15.12■□□□□ 0.01
SNX1-208ENST00000559844 A0A0D9SG52 128 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 IFNA2P01563 188 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 ZNF728P0DKX0 622 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 RPS2P15880 293 aaKnown RBP15.11■□□□□ 0.01
SNX1-208ENST00000559844 FAM76BQ5HYJ3 339 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 THAP6Q8TBB0 222 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 ADAT1Q9BUB4 502 aaKnown RBP15.11■□□□□ 0.01
SNX1-208ENST00000559844 ARL6Q9H0F7 186 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 TENM4Q6N022 2769 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 CLEC18AA5D8T8 446 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 TMEM210A6NLX4 147 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 KNG1P01042 644 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 IGLV1-44P01699 117 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 RBMXP38159 391 aaKnown RBP15.11■□□□□ 0.01
SNX1-208ENST00000559844 UCP3P55916 312 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 ERVS71-1P61550 626 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 RBM39Q14498 530 aaKnown RBP15.11■□□□□ 0.01
SNX1-208ENST00000559844 OR8H3Q8N146 312 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 CLEC18CQ8NCF0 446 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 NEK7Q8TDX7 302 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 PIK3IP1Q96FE7 263 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 HS3ST6Q96QI5 342 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 BCL2L14Q9BZR8 327 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 IFT22Q9H7X7 185 aa15.11■□□□□ 0.01
SNX1-208ENST00000559844 C13orf42A0A1B0GVH6 325 aa15.1■□□□□ 0.01
SNX1-208ENST00000559844 OR5H1A6NKK0 313 aa15.1■□□□□ 0.01
SNX1-208ENST00000559844 NAPSAO96009 420 aa15.1■□□□□ 0.01
SNX1-208ENST00000559844 FCGR2CP31995 323 aa15.1■□□□□ 0.01
SNX1-208ENST00000559844 PSG7Q13046 419 aa15.1■□□□□ 0.01
SNX1-208ENST00000559844 SNTB1Q13884 538 aaKnown RBP15.1■□□□□ 0.01
SNX1-208ENST00000559844 ZNF345Q14585 488 aa15.1■□□□□ 0.01
SNX1-208ENST00000559844 KLF14Q8TD94 323 aaPredicted RBP15.1■□□□□ 0.01
SNX1-208ENST00000559844 MARS2Q96GW9 593 aaKnown RBP15.1■□□□□ 0.01
SNX1-208ENST00000559844 C1QTNF6Q9BXI9 259 aa15.1■□□□□ 0.01
SNX1-208ENST00000559844 WDR13Q9H1Z4 485 aa15.1■□□□□ 0.01
SNX1-208ENST00000559844 Q9N2K0 584 aa15.1■□□□□ 0.01
SNX1-208ENST00000559844 C1orf123Q9NWV4 160 aa15.1■□□□□ 0.01
SNX1-208ENST00000559844 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.09■□□□□ 0.01
SNX1-208ENST00000559844 TUBAL3A6NHL2 446 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 CRYM-AS1A6NIL9 109 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 OR2F2O95006 317 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 RAB14P61106 215 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 OR2F1Q13607 317 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 ANKRD55Q3KP44 614 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 ABCA11PQ4W5N1 156 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 MOB3AQ96BX8 217 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 TNFSF18Q9UNG2 199 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 TEX13DA0A0J9YY54 714 aaPredicted RBP15.09■□□□□ 0.01
SNX1-208ENST00000559844 KIR2DS1A0A191URI9 304 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 CECR9P0C854 216 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 PSMB6P28072 239 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 KIR2DS4P43632 304 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 HERV-K104P61576 105 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 KIR2DS1Q14954 304 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 OR8G1Q15617 311 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 LRRC37A5PQ49AS3 106 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 SLC38A6Q8IZM9 456 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 SUMF2Q8NBJ7 301 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 VRK1Q99986 396 aaPredicted RBP15.09■□□□□ 0.01
SNX1-208ENST00000559844 LIME1Q9H400 295 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 METTL8Q9H825 291 aaKnown RBP15.09■□□□□ 0.01
SNX1-208ENST00000559844 TMEM100Q9NV29 134 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 RDH8Q9NYR8 311 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 IL36RNQ9UBH0 155 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 KCNIP3Q9Y2W7 256 aa15.09■□□□□ 0.01
SNX1-208ENST00000559844 POM121CA8CG34 1229 aa15.08■□□□□ 0
SNX1-208ENST00000559844 CFDP00746 253 aaPredicted RBP15.08■□□□□ 0
SNX1-208ENST00000559844 CTXN2P0C2S0 81 aa15.08■□□□□ 0
SNX1-208ENST00000559844 CLLU1Q5K131 121 aa15.08■□□□□ 0
SNX1-208ENST00000559844 Q6ZPA2 131 aa15.08■□□□□ 0
SNX1-208ENST00000559844 SCCPDHQ8NBX0 429 aa15.08■□□□□ 0
SNX1-208ENST00000559844 OR8G5Q8NG78 346 aa15.08■□□□□ 0
SNX1-208ENST00000559844 TOMM40LQ969M1 308 aa15.08■□□□□ 0
SNX1-208ENST00000559844 ZNF488Q96MN9 340 aa15.08■□□□□ 0
SNX1-208ENST00000559844 PURGQ9UJV8 347 aaKnown RBP15.08■□□□□ 0
SNX1-208ENST00000559844 SPTAN1Q13813 2472 aaKnown RBP15.08■□□□□ 0
SNX1-208ENST00000559844 TRBV6-6A0A0A6YYG2 114 aa15.07■□□□□ 0
SNX1-208ENST00000559844 MPV17P39210 176 aa15.07■□□□□ 0
SNX1-208ENST00000559844 TIMM23BQ5SRD1 257 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms