RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 SLC16A12Q6ZSM3 486 aa7.27□□□□□ -1.25
HDDC3-204ENST00000559834 OR2W3Q7Z3T1 314 aa7.27□□□□□ -1.25
HDDC3-204ENST00000559834 RNF144BQ7Z419 303 aa7.27□□□□□ -1.25
HDDC3-204ENST00000559834 ZNF329Q86UD4 541 aa7.27□□□□□ -1.25
HDDC3-204ENST00000559834 FOXRED2Q8IWF2 684 aa7.27□□□□□ -1.25
HDDC3-204ENST00000559834 OR5D14Q8NGL3 314 aa7.27□□□□□ -1.25
HDDC3-204ENST00000559834 HAVCR2Q8TDQ0 301 aa7.27□□□□□ -1.25
HDDC3-204ENST00000559834 TRUB1Q8WWH5 349 aaKnown RBP7.27□□□□□ -1.25
HDDC3-204ENST00000559834 RFT1Q96AA3 541 aa7.27□□□□□ -1.25
HDDC3-204ENST00000559834 MRPL48Q96GC5 212 aaKnown RBP7.27□□□□□ -1.25
HDDC3-204ENST00000559834 KIRREL1Q96J84 757 aa7.27□□□□□ -1.25
HDDC3-204ENST00000559834 MBOAT4Q96T53 435 aa7.27□□□□□ -1.25
HDDC3-204ENST00000559834 GON7Q9BXV9 100 aa7.27□□□□□ -1.25
HDDC3-204ENST00000559834 FRRS1LQ9P0K9 344 aa7.27□□□□□ -1.25
HDDC3-204ENST00000559834 MEIKINA0A087WXM9 373 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 SLC33A1O00400 549 aaPredicted RBP7.26□□□□□ -1.25
HDDC3-204ENST00000559834 CCDC159P0C7I6 412 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 CGB3P0DN86 165 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 CGB7P0DN87 165 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 FCGR1AP12314 374 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 TMEM11P17152 192 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 MTNR1BP49286 362 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 ZNF85Q03923 595 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 ATXN7L3Q14CW9 347 aaPredicted RBP7.26□□□□□ -1.25
HDDC3-204ENST00000559834 TEX38Q6PEX7 206 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 C8orf86Q6ZUL3 223 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 SLC35E3Q7Z769 313 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 ZNF695Q8IW36 515 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 SERPINA12Q8IW75 414 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 OR8H3Q8N146 312 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 DRAM1Q8N682 238 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 C5orf56Q8N8D9 126 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 KLHL30-AS1Q8NEE0 82 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 OR10A7Q8NGE5 316 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 OR5D18Q8NGL1 313 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 OR13C3Q8NGS6 347 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 OR56B4Q8NH76 319 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 EME1Q96AY2 570 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 CPNE2Q96FN4 548 aaPredicted RBP7.26□□□□□ -1.25
HDDC3-204ENST00000559834 COQ2Q96H96 371 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 P2RX4Q99571 388 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 CIB1Q99828 191 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 GABARAPL1Q9H0R8 117 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 ZCCHC4Q9H5U6 513 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 IDI2-AS1Q9NZ38 188 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 AP4S1Q9Y587 144 aa7.26□□□□□ -1.25
HDDC3-204ENST00000559834 SNTNA6NMZ2 147 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 H0YJX3 145 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 CCL24O00175 119 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 SLC16A6O15403 523 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 MAGEB3O15480 346 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 ZFPL1O95159 310 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 GAPDHP04406 335 aaKnown RBP7.25□□□□□ -1.25
HDDC3-204ENST00000559834 HCKP08631 526 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 GZMHP20718 246 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 POLR2IP36954 125 aaKnown RBP7.25□□□□□ -1.25
HDDC3-204ENST00000559834 GLP1RP43220 463 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 HNF4GQ14541 408 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 KISS1Q15726 138 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 PNLIPRP3Q17RR3 467 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 PAN3Q58A45 887 aaKnown RBP7.25□□□□□ -1.25
HDDC3-204ENST00000559834 ETV3LQ6ZN32 361 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 AMIGO2Q86SJ2 522 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 OR51T1Q8NGJ9 327 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 OR13C9Q8NGT0 318 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 OR10X1Q8NGY0 326 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 SLC7A6OSQ96CW6 309 aaPredicted RBP7.25□□□□□ -1.25
HDDC3-204ENST00000559834 NOL4LQ96MY1 436 aaPredicted RBP7.25□□□□□ -1.25
HDDC3-204ENST00000559834 SPACA5Q96QH8 159 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 NR1H4Q96RI1 486 aaPredicted RBP7.25□□□□□ -1.25
HDDC3-204ENST00000559834 OSBPL10Q9BXB5 764 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 RIBC2Q9H4K1 309 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 LINC00574Q9H8X3 128 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 IMPAD1Q9NX62 359 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 CALYQ9NYX4 217 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 PSG11Q9UQ72 335 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 MYRFQ9Y2G1 1151 aa7.25□□□□□ -1.25
HDDC3-204ENST00000559834 OR4C45A6NMZ5 311 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 NCBP2LA6PVI3 153 aaKnown RBP7.24□□□□□ -1.25
HDDC3-204ENST00000559834 NPIPB11E5RHQ5 1161 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 H0YHG0 523 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 J3QLW9 94 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 AP4M1O00189 453 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 EBAG9O00559 213 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 SULT1B1O43704 296 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 MPZL2O60487 215 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 IL1AP01583 271 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 IGKV1D-33P01593 117 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 IGKV1-33P01594 117 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 IGHV3-7P01780 117 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 IGHG2P01859 326 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 ZNF19P17023 458 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 KCNJ3P48549 501 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 RAB25P57735 213 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 NANOS3P60323 173 aaKnown RBP7.24□□□□□ -1.25
HDDC3-204ENST00000559834 ALKBH1Q13686 389 aaKnown RBP7.24□□□□□ -1.25
HDDC3-204ENST00000559834 CDK5R1Q15078 307 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 KLHL22Q53GT1 634 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 CXorf66Q5JRM2 361 aaPredicted RBP7.24□□□□□ -1.25
HDDC3-204ENST00000559834 SLC25A30Q5SVS4 291 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms