RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 COQ2Q96H96 371 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 SLC6A7Q99884 636 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 SHARPINQ9H0F6 387 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 CLEC4MQ9H2X3 399 aaPredicted RBP14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 PLEKHF2Q9H8W4 249 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 TMEM165Q9HC07 324 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 FAIMQ9NVQ4 179 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 RASL12Q9NYN1 266 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 DOPEY2Q9Y3R5 2298 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 ASH1LQ9NR48 2969 aaKnown RBP14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 KIAA2026Q5HYC2 2103 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 FAM240BA0A1B0GVZ2 78 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 FCN3O75636 299 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 RAB3DO95716 219 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 LMO1P25800 156 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 AP3S2P59780 193 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 ARL6IP1Q15041 203 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 MZT2BQ6NZ67 158 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 FAM216BQ8N7L0 139 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 OR51S1Q8NGJ8 323 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 CCDC107Q8WV48 283 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 SPACA1Q9HBV2 294 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 CHMP1AQ9HD42 196 aaPredicted RBP14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 TAS2R8Q9NYW2 309 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 MAB21L2Q9Y586 359 aa14.48□□□□□ -0.09
CHRNA3-206ENST00000559658 A0A0B4J293 547 aa14.47□□□□□ -0.09
CHRNA3-206ENST00000559658 OOEPA6NGQ2 149 aa14.47□□□□□ -0.09
CHRNA3-206ENST00000559658 SDCBPO00560 298 aaPredicted RBP14.47□□□□□ -0.09
CHRNA3-206ENST00000559658 IRF2P14316 349 aa14.47□□□□□ -0.09
CHRNA3-206ENST00000559658 RCC1P18754 421 aaPredicted RBP14.47□□□□□ -0.09
CHRNA3-206ENST00000559658 RAB25P57735 213 aa14.47□□□□□ -0.09
CHRNA3-206ENST00000559658 UBALD1Q8TB05 177 aa14.47□□□□□ -0.09
CHRNA3-206ENST00000559658 MRGPRFQ96AM1 343 aa14.47□□□□□ -0.09
CHRNA3-206ENST00000559658 FLVCR2Q9UPI3 526 aa14.47□□□□□ -0.09
CHRNA3-206ENST00000559658 PLEKHA6Q9Y2H5 1048 aa14.47□□□□□ -0.09
CHRNA3-206ENST00000559658 AMY2AP04746 511 aa14.46□□□□□ -0.09
CHRNA3-206ENST00000559658 MRPS15P82914 257 aaKnown RBP14.46□□□□□ -0.09
CHRNA3-206ENST00000559658 AESQ08117 197 aa14.46□□□□□ -0.09
CHRNA3-206ENST00000559658 RSBN1Q5VWQ0 802 aaPredicted RBP14.46□□□□□ -0.09
CHRNA3-206ENST00000559658 TEX36Q5VZQ5 186 aa14.46□□□□□ -0.09
CHRNA3-206ENST00000559658 SP5Q6BEB4 398 aaPredicted RBP14.46□□□□□ -0.09
CHRNA3-206ENST00000559658 NRGNQ92686 78 aa14.46□□□□□ -0.09
CHRNA3-206ENST00000559658 GAFA1Q96PS6 74 aa14.46□□□□□ -0.09
CHRNA3-206ENST00000559658 CCL13Q99616 98 aa14.46□□□□□ -0.09
CHRNA3-206ENST00000559658 TRAV6A0A075B6T7 132 aa14.46□□□□□ -0.1
CHRNA3-206ENST00000559658 LRRC30A6NM36 301 aa14.46□□□□□ -0.1
CHRNA3-206ENST00000559658 RP2O75695 350 aa14.46□□□□□ -0.1
CHRNA3-206ENST00000559658 DTYMKP23919 212 aa14.46□□□□□ -0.1
CHRNA3-206ENST00000559658 CBX5P45973 191 aa14.46□□□□□ -0.1
CHRNA3-206ENST00000559658 ZMYND11Q15326 602 aa14.46□□□□□ -0.1
CHRNA3-206ENST00000559658 ZNF497Q6ZNH5 498 aa14.46□□□□□ -0.1
CHRNA3-206ENST00000559658 HPS1Q92902 700 aa14.46□□□□□ -0.1
CHRNA3-206ENST00000559658 DCTN5Q9BTE1 182 aa14.46□□□□□ -0.1
CHRNA3-206ENST00000559658 LIME1Q9H400 295 aa14.46□□□□□ -0.1
CHRNA3-206ENST00000559658 NUDT15Q9NV35 164 aa14.46□□□□□ -0.1
CHRNA3-206ENST00000559658 CENPXA8MT69 81 aa14.45□□□□□ -0.1
CHRNA3-206ENST00000559658 GSTT2P0CG29 244 aa14.45□□□□□ -0.1
CHRNA3-206ENST00000559658 EDDM3AQ14507 147 aa14.45□□□□□ -0.1
CHRNA3-206ENST00000559658 RNASE10Q5GAN6 216 aaKnown RBP14.45□□□□□ -0.1
CHRNA3-206ENST00000559658 ZNF782Q6ZMW2 699 aaPredicted RBP14.45□□□□□ -0.1
CHRNA3-206ENST00000559658 DUSP18Q8NEJ0 188 aa14.45□□□□□ -0.1
CHRNA3-206ENST00000559658 C7orf50Q9BRJ6 194 aaKnown RBP14.45□□□□□ -0.1
CHRNA3-206ENST00000559658 Q9N2K0 584 aa14.45□□□□□ -0.1
CHRNA3-206ENST00000559658 ANXA10Q9UJ72 324 aa14.45□□□□□ -0.1
CHRNA3-206ENST00000559658 SPG11Q96JI7 2443 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 IFNL4K9M1U5 179 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 GLIPR1P48060 266 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 RBM39Q14498 530 aaKnown RBP14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 HERPUD1Q15011 391 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 GRK1Q15835 563 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 LYPD2Q6UXB3 125 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 ZNF295-AS1Q8N0V1 137 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 GLS2Q9UI32 602 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 ZNF107Q9UII5 783 aaPredicted RBP14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 KIF25Q9UIL4 384 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 DSCAML1Q8TD84 2053 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 PPIAL4EA0A075B759 164 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 PPIAL4DF5H284 164 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 LGALS8O00214 317 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 TCRBP04435 133 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 SCTP09683 121 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 PPIAL4FP0DN26 164 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 COX6B1P14854 86 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 TLE4Q04727 773 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 HFEQ30201 348 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 SCGB2B2Q4G0G5 96 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 IGSF11Q5DX21 431 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 AVPI1Q5T686 147 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 SHEQ5VZ18 495 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 GAPTQ8N292 157 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 MINDY2Q8NBR6 621 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 OR5AP2Q8NGF4 316 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 OR13C8Q8NGS7 320 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 IGFBPL1Q8WX77 278 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 RAB1BQ9H0U4 201 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 DPAGT1Q9H3H5 408 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 EHFQ9NZC4 300 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 PPIAL4AQ9Y536 164 aa14.44□□□□□ -0.1
CHRNA3-206ENST00000559658 NBPF19A0A087WUL8 3843 aa14.43□□□□□ -0.1
CHRNA3-206ENST00000559658 VPS13CQ709C8 3753 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms