RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 OR6C3Q9NZP0 311 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 AMMECR1Q9Y4X0 333 aaPredicted RBP10.37□□□□□ -0.75
TPM1-220ENST00000559556 TNCP24821 2201 aa10.37□□□□□ -0.75
TPM1-220ENST00000559556 KBTBD11-OT1A0A1B0GTJ5 212 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 A0A1W2PPI3 338 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 ERICH4A6NGS2 130 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 J3QRE1 110 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 FGF16O43320 207 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 SNRNP70P08621 437 aaKnown RBP10.36□□□□□ -0.75
TPM1-220ENST00000559556 HTR1AP08908 422 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 OCM2P0CE71 109 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 OCMP0CE72 109 aaPredicted RBP10.36□□□□□ -0.75
TPM1-220ENST00000559556 CGB3P0DN86 165 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 CGB7P0DN87 165 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 NFYBP25208 207 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 ZP1P60852 638 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 SCN1BQ07699 218 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 OR2W3Q7Z3T1 314 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 AMIGO2Q86SJ2 522 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 C5orf56Q8N8D9 126 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 OR13C3Q8NGS6 347 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 OR56B4Q8NH76 319 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 RPEQ96AT9 228 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 MCRIP2Q9BUT9 160 aaKnown RBP10.36□□□□□ -0.75
TPM1-220ENST00000559556 NCOR1P1Q9H4R4 102 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 LINC00574Q9H8X3 128 aa10.36□□□□□ -0.75
TPM1-220ENST00000559556 OR4C45A6NMZ5 311 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 J3QR06 171 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 SLC16A6O15403 523 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 FCGR1AP12314 374 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 GLP1RP43220 463 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 PAX5Q02548 391 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 ZNF329Q86UD4 541 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 OR8H3Q8N146 312 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 NOL4LQ96MY1 436 aaPredicted RBP10.35□□□□□ -0.75
TPM1-220ENST00000559556 P2RX4Q99571 388 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 RIBC2Q9H4K1 309 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 NEK6Q9HC98 313 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 ZFP57Q9NU63 452 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 CALYQ9NYX4 217 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 OAZ3Q9UMX2 235 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 MYRFQ9Y2G1 1151 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 AP4S1Q9Y587 144 aa10.35□□□□□ -0.75
TPM1-220ENST00000559556 H0YJX3 145 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 DEGS1O15121 323 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 IL1AP01583 271 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 IGHG2P01859 326 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 VSIG8P0DPA2 414 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 DBTP11182 482 aaKnown RBP10.34□□□□□ -0.75
TPM1-220ENST00000559556 MTNR1BP49286 362 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 RAB7AP51149 207 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 MADCAM1Q13477 382 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 KISS1Q15726 138 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 ELP2Q6IA86 826 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 C18orf65Q6ZTR6 163 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 C8orf86Q6ZUL3 223 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 DRAM1Q8N682 238 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 ZNF565Q8N9K5 539 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 KLHL30-AS1Q8NEE0 82 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 OR13A1Q8NGR1 328 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 TRUB1Q8WWH5 349 aaKnown RBP10.34□□□□□ -0.75
TPM1-220ENST00000559556 PELI1Q96FA3 418 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 OSBPL10Q9BXB5 764 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 ZCCHC4Q9H5U6 513 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 ING3Q9NXR8 418 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 KIF25Q9UIL4 384 aa10.34□□□□□ -0.75
TPM1-220ENST00000559556 DAPL1A0PJW8 107 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 NPIPB11E5RHQ5 1161 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 H0YHG0 523 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 SULT1B1O43704 296 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 HCKP08631 526 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 CCDC159P0C7I6 412 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 TMEM11P17152 192 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 MYCNOSP40205 109 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 ALKBH1Q13686 389 aaKnown RBP10.33□□□□□ -0.76
TPM1-220ENST00000559556 DIAPH2-AS1Q14236 149 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 HES1Q14469 280 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 PAN3Q58A45 887 aaKnown RBP10.33□□□□□ -0.76
TPM1-220ENST00000559556 SLC25A30Q5SVS4 291 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 COMMD1Q8N668 190 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 HAVCR2Q8TDQ0 301 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 LEAP2Q969E1 77 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 RNFT2Q96EX2 444 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 CENPNQ96H22 339 aaPredicted RBP10.33□□□□□ -0.76
TPM1-220ENST00000559556 HRASLS5Q96KN8 279 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 IMPAD1Q9NX62 359 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 IDI2-AS1Q9NZ38 188 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 ZMAT5Q9UDW3 170 aaKnown RBP10.33□□□□□ -0.76
TPM1-220ENST00000559556 PSG11Q9UQ72 335 aa10.33□□□□□ -0.76
TPM1-220ENST00000559556 MEIKINA0A087WXM9 373 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 TRAV24A0A0B4J272 114 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 SERPINE3A8MV23 424 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 NUDT19A8MXV4 375 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 J3QLW9 94 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 HSPB6O14558 160 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 TMEM225BP0DP42 221 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 ZNF19P17023 458 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 C21orf33P30042 268 aaPredicted RBP10.32□□□□□ -0.76
TPM1-220ENST00000559556 KCNJ3P48549 501 aa10.32□□□□□ -0.76
TPM1-220ENST00000559556 SNRPGP62308 76 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms