RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 PDCD1LG2Q9BQ51 273 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 AURKAIP1Q9NWT8 199 aaPredicted RBP11.92□□□□□ -0.5
LRRC28-213ENST00000559399 ERVK13-1Q9NX77 482 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 TSSC4Q9Y5U2 329 aaPredicted RBP11.92□□□□□ -0.5
LRRC28-213ENST00000559399 LY6LH3BQJ8 138 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 PF4P02776 101 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 RAB3AP20336 220 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 NFYBP25208 207 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 GLP1RP43220 463 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 GBX2P52951 348 aaPredicted RBP11.91□□□□□ -0.5
LRRC28-213ENST00000559399 RAB40BQ12829 278 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 PAN3Q58A45 887 aaKnown RBP11.91□□□□□ -0.5
LRRC28-213ENST00000559399 ELP2Q6IA86 826 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 ZNF565Q8N9K5 539 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 PXT1Q8NFP0 134 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 OR51T1Q8NGJ9 327 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 OR9G1Q8NH87 305 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 HAVCR2Q8TDQ0 301 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 MYDGFQ969H8 173 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 RPEQ96AT9 228 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 KIRREL1Q96J84 757 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 PCDHB16Q9NRJ7 776 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 CALYQ9NYX4 217 aa11.91□□□□□ -0.5
LRRC28-213ENST00000559399 AMMECR1Q9Y4X0 333 aaPredicted RBP11.91□□□□□ -0.5
LRRC28-213ENST00000559399 MEIKINA0A087WXM9 373 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 SH2D7A6NKC9 451 aaPredicted RBP11.9□□□□□ -0.5
LRRC28-213ENST00000559399 E9PI62 339 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 MAGEB3O15480 346 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 AMY1AP04745 511 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 AMY2AP04746 511 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 FAM106CPP0CH98 169 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 IGLL1P15814 213 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 IL13RA2Q14627 380 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 ZSCAN26Q16670 478 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 KHDC1LQ5JSQ8 128 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 UTF1Q5T230 341 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 FOXB2Q5VYV0 432 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 RHOXF1Q8NHV9 184 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 TNFAIP8L1Q8WVP5 186 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 TOMM40LQ969M1 308 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 NR1H4Q96RI1 486 aaPredicted RBP11.9□□□□□ -0.5
LRRC28-213ENST00000559399 ZNF649Q9BS31 505 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 BARHL1Q9BZE3 327 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 FAM192AQ9GZU8 254 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 AMBNQ9NP70 447 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 KIF25Q9UIL4 384 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 MOB4Q9Y3A3 225 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 HSPE1-MOB4S4R3N1 261 aa11.9□□□□□ -0.5
LRRC28-213ENST00000559399 TRAV24A0A0B4J272 114 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 GABRPO00591 440 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 IL1AP01583 271 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 CGB3P0DN86 165 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 CGB7P0DN87 165 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 C21orf33P30042 268 aaPredicted RBP11.89□□□□□ -0.51
LRRC28-213ENST00000559399 SLC35A2P78381 396 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 C9orf152Q5JTZ5 239 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 ZNF529Q6P280 563 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 SATL1Q86VE3 508 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 OSR2Q8N2R0 312 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 OR51A2Q8NGJ7 313 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 OR52I1Q8NGK6 324 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 OR13A1Q8NGR1 328 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 CNIH3Q8TBE1 160 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 GPER1Q99527 375 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 C9orf16Q9BUW7 83 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 NCOR1P1Q9H4R4 102 aa11.89□□□□□ -0.51
LRRC28-213ENST00000559399 RPL36Q9Y3U8 105 aaKnown RBP11.89□□□□□ -0.51
LRRC28-213ENST00000559399 J3QR06 171 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 CLIC3O95833 236 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 SOX2P48431 317 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 KCNJ3P48549 501 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 PAX5Q02548 391 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 MADCAM1Q13477 382 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 RSU1Q15404 277 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 PIGYQ3MUY2 71 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 C10orf99Q6UWK7 81 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 THNSL2Q86YJ6 484 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 OR56B4Q8NH76 319 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 MRGPRDQ8TDS7 321 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 RCC1LQ96I51 464 aaKnown RBP11.88□□□□□ -0.51
LRRC28-213ENST00000559399 JAM3Q9BX67 310 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 LINC00574Q9H8X3 128 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 MRPS18AQ9NVS2 196 aaKnown RBP11.88□□□□□ -0.51
LRRC28-213ENST00000559399 TAS2R4Q9NYW5 299 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 IDI2-AS1Q9NZ38 188 aa11.88□□□□□ -0.51
LRRC28-213ENST00000559399 LOC100130705A0A1B0GUX0 176 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 FAM90A18PA6NE21 464 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 FAM90A16PA6NEW6 464 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 FAM90A20PA6NIJ5 464 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 FAM90A9PA6NNJ1 464 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 FAM90A12PA8MX19 464 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 FAM90A5PA8MXJ8 464 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 NPIPB11E5RHQ5 1161 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 IGHV3-7P01780 117 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 CD2P06729 351 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 SNRNP70P08621 437 aaKnown RBP11.87□□□□□ -0.51
LRRC28-213ENST00000559399 FAM90A15PP0C7V4 464 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 FAM90A13PP0C7W8 464 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 FAM90A14PP0C7W9 464 aa11.87□□□□□ -0.51
LRRC28-213ENST00000559399 FAM90A24PP0C7X0 464 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms