RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 PITPNAQ00169 270 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 PAX5Q02548 391 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 KRBOX4Q5JUW0 171 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 NKAPLQ5M9Q1 402 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 SLC35E4Q6ICL7 350 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 C17orf107Q6ZR85 190 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 BTN2A1Q7KYR7 527 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 SAMD12Q8N8I0 201 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 ZNF565Q8N9K5 539 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 OR4S1Q8NGB4 309 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 OR5H6Q8NGV6 325 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 C8orf46Q8TAG6 207 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 DCTN5Q9BTE1 182 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 SHARPINQ9H0F6 387 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 ABCG5Q9H222 651 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 PPA2Q9H2U2 334 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 MMP27Q9H306 513 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 ETAA1Q9NY74 926 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 OR6C3Q9NZP0 311 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 CTSZQ9UBR2 303 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 METRNQ9UJH8 293 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 MGAT4AQ9UM21 535 aa7.66□□□□□ -1.18
LDLR-210ENST00000559340 FLNAP21333 2647 aaKnown RBP7.66□□□□□ -1.18
LDLR-210ENST00000559340 A0A0G2JMP0 313 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 A0A0X1KG70 313 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 KIR2DS1A0A191URI9 304 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 SERPINE3A8MV23 424 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 FAM25AB3EWG3 89 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 FAM25CB3EWG5 89 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 FAM25GB3EWG6 89 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 SOCS1O15524 211 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 RGS5O15539 181 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 PHF1O43189 567 aaPredicted RBP7.65□□□□□ -1.18
LDLR-210ENST00000559340 PSPNO60542 156 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 CLPXO76031 633 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 TPPPO94811 219 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 GSTP1P09211 210 aaKnown RBP7.65□□□□□ -1.18
LDLR-210ENST00000559340 CD3GP09693 182 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 PPIAL4GP0DN37 164 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 IGHV4-31P0DP07 118 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 GZMHP20718 246 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 CHATP28329 748 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 IL2RGP31785 369 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 S100A5P33763 92 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 MNDAP41218 407 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 P2RX3P56373 397 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 ARFRP1Q13795 201 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 EDDM3AQ14507 147 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 PDCD1Q15116 288 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 ZFHX3Q15911 3703 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 PNLIPRP3Q17RR3 467 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 DCAF12L2Q5VW00 463 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 TRAT1Q6PIZ9 186 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 BAIAP2L2Q6UXY1 529 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 BIVMQ86UB2 503 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 FAM185AQ8N0U4 392 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 OR4M2Q8NGB6 313 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 MCFD2Q8NI22 146 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 TMEM186Q96B77 213 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 CHST6Q9GZX3 395 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 KCNK15Q9H427 330 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 TAS2R3Q9NYW6 316 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 KCNIP1Q9NZI2 227 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 RPUSD1Q9UJJ7 312 aaKnown RBP7.65□□□□□ -1.18
LDLR-210ENST00000559340 KCNS2Q9ULS6 477 aa7.65□□□□□ -1.18
LDLR-210ENST00000559340 UBE2J1Q9Y385 318 aaPredicted RBP7.65□□□□□ -1.18
LDLR-210ENST00000559340 TRAV18A0A075B6X5 111 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 MEIKINA0A087WXM9 373 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 IGHV2-70DA0A0C4DH43 119 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 ODAMA1E959 279 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 UBE2QL1A1L167 161 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 KIAA1324LA8MWY0 1029 aaPredicted RBP7.64□□□□□ -1.19
LDLR-210ENST00000559340 RAB27BO00194 218 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 HSPB6O14558 160 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 XRCC3O43542 346 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 CD5LO43866 347 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 TFF1P04155 84 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 SELLP14151 372 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 HOXB4P17483 251 aaPredicted RBP7.64□□□□□ -1.19
LDLR-210ENST00000559340 ZFP36P26651 326 aaKnown RBP7.64□□□□□ -1.19
LDLR-210ENST00000559340 EFNB2P52799 333 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 TMEM50BP56557 158 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 SEC61A1P61619 476 aaKnown RBP7.64□□□□□ -1.19
LDLR-210ENST00000559340 AESQ08117 197 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 CDNFQ49AH0 187 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 TMEM69Q5SWH9 247 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 C6orf183Q5T699 404 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 METTL11BQ5VVY1 283 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 SIGIRRQ6IA17 410 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 C1orf122Q6ZSJ8 110 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 MOB1BQ7L9L4 216 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 TRAPPC6BQ86SZ2 158 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 ZNF554Q86TJ5 538 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 BPIFB2Q8N4F0 458 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 KIR3DL3Q8N743 410 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 MAPK1IP1LQ8NDC0 245 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 LY6G5BQ8NDX9 201 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 CORO2AQ92828 525 aa7.64□□□□□ -1.19
LDLR-210ENST00000559340 MSI2Q96DH6 328 aaKnown RBP7.64□□□□□ -1.19
LDLR-210ENST00000559340 ARHGAP5-AS1Q96IT6 56 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms