RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ZNF596Q8TC21 504 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 NEK7Q8TDX7 302 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 NRG4Q8WWG1 115 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 RGP1Q92546 391 aaPredicted RBP3.57□□□□□ -1.84
SNX1-205ENST00000559339 PHYHIPQ92561 330 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 MALSU1Q96EH3 234 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 CNBD2Q96M20 576 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 C1orf147Q96MC9 270 aaPredicted RBP3.57□□□□□ -1.84
SNX1-205ENST00000559339 DERL3Q96Q80 235 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 SSX3Q99909 188 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 UQCC2Q9BRT2 126 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 TMED9Q9BVK6 235 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 CLEC7AQ9BXN2 247 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 CHIAQ9BZP6 476 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 CST11Q9H112 138 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 MEGF9Q9H1U4 602 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 TMEM133Q9H2Q1 129 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 PPA2Q9H2U2 334 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 SPACA1Q9HBV2 294 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 RAB9BQ9NP90 201 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 FKBP14Q9NWM8 211 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 ING3Q9NXR8 418 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 TAS2R3Q9NYW6 316 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 IL36GQ9NZH8 169 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 ZNRD1Q9P1U0 126 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 IL36RNQ9UBH0 155 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 GHRLQ9UBU3 117 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 PITPNC1Q9UKF7 332 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 VPREB3Q9UKI3 123 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 ST3GAL6Q9Y274 331 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 TBL2Q9Y4P3 447 aaKnown RBP3.57□□□□□ -1.84
SNX1-205ENST00000559339 SOX21Q9Y651 276 aaPredicted RBP3.57□□□□□ -1.84
SNX1-205ENST00000559339 SIRT4Q9Y6E7 314 aaPredicted RBP3.57□□□□□ -1.84
SNX1-205ENST00000559339 SESN1Q9Y6P5 492 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 MINOS1-NBL1R4GNA1 71 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 TRAV8-7A0A075B6U6 113 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 IGHV2-26A0A0B4J1V2 119 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 KBTBD11-OT1A0A1B0GTJ5 212 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 ODAMA1E959 279 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 MEX3AA1L020 520 aaKnown RBP3.56□□□□□ -1.84
SNX1-205ENST00000559339 ZNF729A6NN14 1252 aaPredicted RBP3.56□□□□□ -1.84
SNX1-205ENST00000559339 VGLL3A8MV65 326 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 LEUTXA8MZ59 168 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 MCRIP1C9JLW8 97 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 H3BUX3 64 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 GEMIN2O14893 280 aaKnown RBP3.56□□□□□ -1.84
SNX1-205ENST00000559339 ST8SIA5O15466 376 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 GPR137BO60478 399 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 MRPS14O60783 128 aaKnown RBP3.56□□□□□ -1.84
SNX1-205ENST00000559339 PEX14O75381 377 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 CRTAPO75718 401 aaPredicted RBP3.56□□□□□ -1.84
SNX1-205ENST00000559339 ARL6IP5O75915 188 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 IGHV4-59P01825 116 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 UBBP0CG47 229 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 SRMP19623 302 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 OMGP23515 440 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 CRHBPP24387 322 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 CDK2P24941 298 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 HTR1DP28221 377 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 GABRA5P31644 462 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 BRS3P32247 399 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 MNDAP41218 407 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 GLP1RP43220 463 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 GLIPR1P48060 266 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 SMCPP49901 116 aaPredicted RBP3.56□□□□□ -1.84
SNX1-205ENST00000559339 PSMD7P51665 324 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 RAG2P55895 527 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 RBM11P57052 281 aaKnown RBP3.56□□□□□ -1.84
SNX1-205ENST00000559339 RPS11P62280 158 aaKnown RBP eCLIP3.56□□□□□ -1.84
SNX1-205ENST00000559339 PAX5Q02548 391 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 MLLT11Q13015 90 aaPredicted RBP3.56□□□□□ -1.84
SNX1-205ENST00000559339 RBM39Q14498 530 aaKnown RBP3.56□□□□□ -1.84
SNX1-205ENST00000559339 SSX2Q16385 188 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 TAF9Q16594 264 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 MPV17LQ2QL34 196 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 LRRC75BQ2VPJ9 315 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 PIGYQ3MUY2 71 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 HSD17B12Q53GQ0 312 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 NHLRC3Q5JS37 347 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 LIPKQ5VXJ0 399 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 ZNF626Q68DY1 528 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 ASPHD2Q6ICH7 369 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 CCDC144NLQ6NUI1 221 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 Q6P435 159 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 GLIPR1L1Q6UWM5 242 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 ASCL4Q6XD76 172 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 CEACAM19Q7Z692 300 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 ABHD12Q8N2K0 398 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 C11orf42Q8N5U0 333 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 Q8NFD4 153 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 OR10K1Q8NGX5 313 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 CAPSLQ8WWF8 208 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 CORO2AQ92828 525 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 TMEM203Q969S6 136 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 MUL1Q969V5 352 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 AKR1E2Q96JD6 320 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 MGLLQ99685 303 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 ZNF747Q9BV97 191 aa3.56□□□□□ -1.84
SNX1-205ENST00000559339 DPCDQ9BVM2 203 aaPredicted RBP3.56□□□□□ -1.84
SNX1-205ENST00000559339 NPFFR1Q9GZQ6 430 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms