RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ACTL9Q8TC94 416 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 CCDC12Q8WUD4 166 aaPredicted RBP2.39□□□□□ -2.03
CASC4-206ENST00000558847 RBPMSQ93062 196 aaKnown RBP2.39□□□□□ -2.03
CASC4-206ENST00000558847 PGLYRP3Q96LB9 341 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 UGT2B28Q9BY64 529 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 ULBP1Q9BZM6 244 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 TXNIPQ9H3M7 391 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 VSIRQ9H7M9 311 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 ZNF706Q9Y5V0 76 aaPredicted RBP2.39□□□□□ -2.03
CASC4-206ENST00000558847 URGCP-MRPS24S4R325 110 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 SVILO95425 2214 aa2.39□□□□□ -2.03
CASC4-206ENST00000558847 MKRN2OSH3BPM6 223 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 SCN2BO60939 215 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 POP7O75817 140 aaKnown RBP2.38□□□□□ -2.03
CASC4-206ENST00000558847 RNASE2P10153 161 aaKnown RBP2.38□□□□□ -2.03
CASC4-206ENST00000558847 SPNP16150 400 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 TGFBR1P36897 503 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 PLTPP55058 493 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 MAP3K7CLP57077 242 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 RAB8AP61006 207 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 FMODQ06828 376 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 PAFAH1B3Q15102 231 aaKnown RBP2.38□□□□□ -2.03
CASC4-206ENST00000558847 PDPK2PQ6A1A2 396 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 Q6ZQT7 251 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 TMEM136Q6ZRR5 245 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 OTUD6BQ8N6M0 293 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 BPIFB6Q8NFQ5 453 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 OR4C13Q8NGP0 309 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 ZNF721Q8TF20 911 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 OR2V2Q96R30 315 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 ZNF251Q9BRH9 671 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 TAPBPLQ9BX59 468 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 EBPLQ9BY08 206 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 PLA2G12AQ9BZM1 189 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 DHX35Q9H5Z1 703 aaKnown RBP2.38□□□□□ -2.03
CASC4-206ENST00000558847 C1orf109Q9NX04 203 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 MS4A12Q9NXJ0 267 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 POMPQ9Y244 141 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 BRWD3Q6RI45 1802 aa2.38□□□□□ -2.03
CASC4-206ENST00000558847 ADAMTSL3P82987 1691 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 TMEM131Q92545 1883 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 DYSFO75923 2080 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 IGHV1-45A0A0A0MS14 117 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 IGKV2-24A0A0C4DH68 120 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 CETN3O15182 167 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 RAB36O95755 333 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 IGHV3-53P01767 116 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 CD5P06127 495 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 IGKV5-2P06315 115 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 GP1BAP07359 652 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 LIMS3P0CW19 117 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 LIMS4P0CW20 117 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 INAFM2P0DMQ5 153 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 ZNF35P13682 527 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 M6PRP20645 277 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 RCVRNP35243 200 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 HSPA13P48723 471 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 PMS2P3Q13401 168 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 LDLRAD2Q5SZI1 272 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 SLC13A5Q86YT5 568 aaPredicted RBP2.37□□□□□ -2.03
CASC4-206ENST00000558847 SELENOHQ8IZQ5 122 aaKnown RBP2.37□□□□□ -2.03
CASC4-206ENST00000558847 DYNC2LI1Q8TCX1 351 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 LINC01587Q99440 93 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 ABCG5Q9H222 651 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 ASCL3Q9NQ33 180 aa2.37□□□□□ -2.03
CASC4-206ENST00000558847 SETD1AO15047 1707 aaKnown RBP2.37□□□□□ -2.03
CASC4-206ENST00000558847 EFCAB9A8MZ26 197 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 TMEM250H0YL14 139 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 SYNGR1O43759 233 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 GPR75O95800 540 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 STC1P52823 247 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 SLAMF1Q13291 335 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 LYZL2Q7Z4W2 148 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 ZIC4Q8N9L1 334 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 GATD1Q8NB37 220 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 OR7G1Q8NGA0 311 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 OR2K2Q8NGT1 345 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 TRIB3Q96RU7 358 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 BCL2L14Q9BZR8 327 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 ZNF436Q9C0F3 470 aaPredicted RBP2.36□□□□□ -2.03
CASC4-206ENST00000558847 DUSP21Q9H596 190 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 TAS2R13Q9NYV9 303 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 ZNF492Q9P255 531 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 NAGKQ9UJ70 344 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 ZBED9Q6R2W3 1325 aa2.36□□□□□ -2.03
CASC4-206ENST00000558847 KIAA1671Q9BY89 1806 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 C9J4A7 227 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 F5H5K5 113 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 H3BQ85 93 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 C15orf65H3BRN8 121 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 ISLRO14498 428 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 CALUO43852 315 aaPredicted RBP2.35□□□□□ -2.03
CASC4-206ENST00000558847 PDYNP01213 254 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 OCMP0CE72 109 aaPredicted RBP2.35□□□□□ -2.03
CASC4-206ENST00000558847 PVALBP20472 110 aaPredicted RBP2.35□□□□□ -2.03
CASC4-206ENST00000558847 CRATP43155 626 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 OR10A3P58181 314 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 FAM3AP98173 230 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 ZNF235Q14590 738 aa2.35□□□□□ -2.03
CASC4-206ENST00000558847 MMDQ15546 238 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms