RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 SSX4O60224 188 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 NAPSAO96009 420 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 TK1P04183 234 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 FCGR3AP08637 254 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 DNASE1P24855 282 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 DEFA1P59665 94 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 DEFA3P59666 94 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 PAX5Q02548 391 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 AVPI1Q5T686 147 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 STEAP3Q658P3 488 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 SLC35E4Q6ICL7 350 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 ZNF497Q6ZNH5 498 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 LYSMD2Q8IV50 215 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 SPICQ8N5J4 248 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 ZNRF1Q8ND25 227 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 DEDD2Q8WXF8 326 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 NRGNQ92686 78 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 HDHD3Q9BSH5 251 aaPredicted RBP14.07□□□□□ -0.16
SNX1-203ENST00000558040 ANAPC10Q9UM13 185 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 MAB21L2Q9Y586 359 aa14.07□□□□□ -0.16
SNX1-203ENST00000558040 TRBV6-6A0A0A6YYG2 114 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 TNFRSF13BO14836 293 aaPredicted RBP14.06□□□□□ -0.16
SNX1-203ENST00000558040 AMY2BP19961 511 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 TAS2R19P59542 299 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 LRRC10Q5BKY1 277 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 KRBOX4Q5JUW0 171 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 GDPD3Q7L5L3 318 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 MOB1BQ7L9L4 216 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 NLRC3Q7RTR2 1065 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 HOGA1Q86XE5 327 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 ZNF525Q8N782 197 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 FAM216BQ8N7L0 139 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 PLPPR1Q8TBJ4 325 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 CYYR1Q96J86 154 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 COX4I2Q96KJ9 171 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 ST6GALNAC5Q9BVH7 336 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 SHARPINQ9H0F6 387 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 BEX4Q9NWD9 120 aaPredicted RBP14.06□□□□□ -0.16
SNX1-203ENST00000558040 MIOXQ9UGB7 285 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 MGAT4AQ9UM21 535 aa14.06□□□□□ -0.16
SNX1-203ENST00000558040 HRNRQ86YZ3 2850 aaPredicted RBP14.05□□□□□ -0.16
SNX1-203ENST00000558040 USP9YO00507 2555 aaPredicted RBP14.05□□□□□ -0.16
SNX1-203ENST00000558040 ANKRD20A5PA0PJZ0 165 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 NDUFS8O00217 210 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 NDUFB3O43676 98 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 NAT1P18440 290 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 TBPP20226 339 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 GIFP27352 417 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 FAUP35544 74 aaKnown RBP14.05□□□□□ -0.16
SNX1-203ENST00000558040 KRTAP10-9P60411 292 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 IFITM3Q01628 133 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 AESQ08117 197 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 SRSF7Q16629 238 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNX1-203ENST00000558040 ACTBL2Q562R1 376 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 RSBN1Q5VWQ0 802 aaPredicted RBP14.05□□□□□ -0.16
SNX1-203ENST00000558040 HIST2H2BCQ6DN03 193 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 CLEC2AQ6UVW9 174 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 GAPTQ8N292 157 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 GVQW1Q8N7I0 195 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 TMEM229BQ8NBD8 167 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 BEST4Q8NFU0 473 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 SETD6Q8TBK2 473 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 MRPL30Q8TCC3 161 aaKnown RBP14.05□□□□□ -0.16
SNX1-203ENST00000558040 PERPQ96FX8 193 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 C7orf50Q9BRJ6 194 aaKnown RBP14.05□□□□□ -0.16
SNX1-203ENST00000558040 ZNF286AQ9HBT8 521 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 ING3Q9NXR8 418 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 SLC25A10Q9UBX3 287 aaPredicted RBP14.05□□□□□ -0.16
SNX1-203ENST00000558040 TRAPPC2LQ9UL33 140 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 PCDHB10Q9UN67 800 aa14.05□□□□□ -0.16
SNX1-203ENST00000558040 KIR2DS1A0A191URI9 304 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 CENPXA8MT69 81 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 CEACAM18A8MTB9 384 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 ZNF736B4DX44 427 aaPredicted RBP14.04□□□□□ -0.16
SNX1-203ENST00000558040 MT-ND4P03905 459 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 AKAIN1P0CW23 69 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 RPS2P15880 293 aaKnown RBP14.04□□□□□ -0.16
SNX1-203ENST00000558040 ERP29P30040 261 aaKnown RBP14.04□□□□□ -0.16
SNX1-203ENST00000558040 KIR2DS4P43632 304 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 DSCR9P59020 149 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 DYRK1AQ13627 763 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 KLF9Q13886 244 aaPredicted RBP14.04□□□□□ -0.16
SNX1-203ENST00000558040 EDDM3AQ14507 147 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 KIR2DS1Q14954 304 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 LYPD2Q6UXB3 125 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 OR8B3Q8NGG8 313 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 FAM168AQ92567 244 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 COQ2Q96H96 371 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 OR8B2Q96RD0 313 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 PIMREGQ9BSJ6 248 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 NCOR1P1Q9H4R4 102 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 Q9N2K0 584 aa14.04□□□□□ -0.16
SNX1-203ENST00000558040 ZNF230Q9UIE0 474 aaPredicted RBP14.04□□□□□ -0.16
SNX1-203ENST00000558040 MEIKINA0A087WXM9 373 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 LINC00854A0A1B0GVQ3 168 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 A0A1B0GW55 424 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 FCER2P06734 321 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 DUX4L2P0CJ85 424 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 DUX4L3P0CJ86 424 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 DUX4L4P0CJ87 422 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms