RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 MXD1Q05195 221 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 MEF2CQ06413 473 aaPredicted RBP11.76□□□□□ -0.53
USP3-205ENST00000557884 NR2C2APQ86WQ0 139 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 OR51D1Q8NGF3 324 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 KCNG3Q8TAE7 436 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 PLPPR1Q8TBJ4 325 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 NEK7Q8TDX7 302 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 FAM3DQ96BQ1 224 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 DMRTB1Q96MA1 342 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 TMEM59Q9BXS4 323 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 MRPS26Q9BYN8 205 aaKnown RBP11.76□□□□□ -0.53
USP3-205ENST00000557884 MS4A7Q9GZW8 240 aaPredicted RBP11.76□□□□□ -0.53
USP3-205ENST00000557884 IFT22Q9H7X7 185 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 FUOMA2VDF0 154 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 IFITM5A6NNB3 132 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 TMEM14DPA8MWL7 114 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 AIREO43918 545 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 CSN2P05814 226 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 CLEC2LP0C7M8 214 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 ZNF728P0DKX0 622 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 SLC2A2P11168 524 aaPredicted RBP11.75□□□□□ -0.53
USP3-205ENST00000557884 PRTN3P24158 256 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 TGFBR1P36897 503 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 DLX6P56179 175 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 RPS27AP62979 156 aaKnown RBP11.75□□□□□ -0.53
USP3-205ENST00000557884 PLA2G7Q13093 441 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 SCGB2A2Q13296 93 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 TIMM50Q3ZCQ8 353 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 RAB12Q6IQ22 244 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 ZNF782Q6ZMW2 699 aaPredicted RBP11.75□□□□□ -0.53
USP3-205ENST00000557884 PNKDQ8N490 385 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 ZNF714Q96N38 554 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 METTL8Q9H825 291 aaKnown RBP11.75□□□□□ -0.53
USP3-205ENST00000557884 STEAP1Q9UHE8 339 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 KIF25Q9UIL4 384 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 PEX16Q9Y5Y5 336 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 LINC00312Q9Y6C7 94 aa11.75□□□□□ -0.53
USP3-205ENST00000557884 MEIKINA0A087WXM9 373 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 TRGV10A0A0A0MS01 117 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 A0A0A6YYD4 124 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 TRAV39A0A0B4J263 110 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 IGHV1-69DA0A0B4J2H0 117 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 TMEM272A0A1B0GTI8 110 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 RNASEK-C17orf49H0YIS7 233 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 IFNA2P01563 188 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 IGHV1-69P01742 117 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 COX7A1P24310 79 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 FPR2P25090 351 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 GLP1RP43220 463 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 KCNJ3P48549 501 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 SRSF2Q01130 221 aaKnown RBP11.74□□□□□ -0.53
USP3-205ENST00000557884 C2orf76Q3KRA6 126 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 NKAPLQ5M9Q1 402 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 RSBN1Q5VWQ0 802 aaPredicted RBP11.74□□□□□ -0.53
USP3-205ENST00000557884 SIGIRRQ6IA17 410 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 C1orf122Q6ZSJ8 110 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 C11orf42Q8N5U0 333 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 OR13F1Q8NGS4 319 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 DYRK2Q92630 601 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 TNFRSF14Q92956 283 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 NICN1Q9BSH3 213 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 BARHL1Q9BZE3 327 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 SPACA1Q9HBV2 294 aa11.74□□□□□ -0.53
USP3-205ENST00000557884 RCC2Q9P258 522 aaKnown RBP11.74□□□□□ -0.53
USP3-205ENST00000557884 MDFIC2A0A1B0GVS7 189 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 hCG_1809904A0A1W2PP81 198 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 A0A1W2PPE2 198 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 A0A1W2PR64 198 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 A0A1W2PRV1 198 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 NOTOA8MTQ0 251 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 C17orf98A8MV24 154 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 MCRIP1C9JLW8 97 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 AIPO00170 330 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 PDCD6O75340 191 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 FUT3P21217 361 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 PRAMEF5Q5TYX0 476 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 NCR3LG1Q68D85 454 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 HCP5Q6MZN7 132 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 OR2W3Q7Z3T1 314 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 RTN4RL2Q86UN3 420 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 OR13A1Q8NGR1 328 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 CCDC107Q8WV48 283 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 FUNDC2Q9BWH2 189 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 LPAR5Q9H1C0 372 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 LIN7BQ9HAP6 207 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 ETAA1Q9NY74 926 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 DAPK2Q9UIK4 370 aa11.73□□□□□ -0.53
USP3-205ENST00000557884 UBE2J1Q9Y385 318 aaPredicted RBP11.73□□□□□ -0.53
USP3-205ENST00000557884 DOCK11Q5JSL3 2073 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 ATRQ13535 2644 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 TMEM30CPA0ZSE6 113 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 UBE2QL1A1L167 161 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 FAM90A10PA6NDY2 464 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 FAM90A18PA6NE21 464 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 FAM90A16PA6NEW6 464 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 FAM90A20PA6NIJ5 464 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 FAM90A8PA6NJQ4 464 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 FAM90A7PA6NKC0 464 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 FAM90A22PA8MWA6 464 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 FAM90A12PA8MX19 464 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms