RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 TTTY10Q9BZA0 68 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 CHST6Q9GZX3 395 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 COMMD4Q9H0A8 199 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 NCOR1P1Q9H4R4 102 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 HMG20AQ9NP66 347 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 KRT84Q9NSB2 600 aa6.87□□□□□ -1.31
VRK1-206ENST00000557222 TCRBV3S1A0A5B6 114 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 MEX3AA1L020 520 aaKnown RBP6.86□□□□□ -1.31
VRK1-206ENST00000557222 ZNF729A6NN14 1252 aaPredicted RBP6.86□□□□□ -1.31
VRK1-206ENST00000557222 ZAR1LA6NP61 321 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 MAGEB4O15481 346 aaPredicted RBP6.86□□□□□ -1.31
VRK1-206ENST00000557222 FGF16O43320 207 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 RAMP3O60896 148 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 FKBP6O75344 327 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 ZFPL1O95159 310 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 MT-ND2P03891 347 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 ISG15P05161 165 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 PRKACAP17612 351 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 ATF1P18846 271 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 NPBWR2P48146 333 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 DAPP51397 102 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 MTCP1P56278 107 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 ISL1P61371 349 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 RPL23AP62750 156 aaKnown RBP6.86□□□□□ -1.31
VRK1-206ENST00000557222 GNGT1P63211 74 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 PDZK1IP1Q13113 114 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 KPNB1Q14974 876 aaKnown RBP6.86□□□□□ -1.31
VRK1-206ENST00000557222 TPTE2P1Q5T6R2 138 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 TMEM244Q5VVB8 128 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 C12orf73Q69YU5 71 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 PLEKHG7Q6ZR37 379 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 SLC16A12Q6ZSM3 486 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 SAXO1Q8IYX7 474 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 TPRX1Q8N7U7 411 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 OR4D6Q8NGJ1 314 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 THTPAQ9BU02 230 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 LINC00574Q9H8X3 128 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 NEK6Q9HC98 313 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 EXOSC4Q9NPD3 245 aaKnown RBP6.86□□□□□ -1.31
VRK1-206ENST00000557222 RBFOX1Q9NWB1 397 aaKnown RBP6.86□□□□□ -1.31
VRK1-206ENST00000557222 OR6C3Q9NZP0 311 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 MOB4Q9Y3A3 225 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 AMMECR1Q9Y4X0 333 aaPredicted RBP6.86□□□□□ -1.31
VRK1-206ENST00000557222 HSPE1-MOB4S4R3N1 261 aa6.86□□□□□ -1.31
VRK1-206ENST00000557222 HUWE1Q7Z6Z7 4374 aaKnown RBP6.85□□□□□ -1.31
VRK1-206ENST00000557222 A0A1W2PQL4 384 aaPredicted RBP6.85□□□□□ -1.31
VRK1-206ENST00000557222 ODAMA1E959 279 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 H0YHG0 523 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 KDM4BO94953 1096 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 RPP14O95059 124 aaKnown RBP6.85□□□□□ -1.31
VRK1-206ENST00000557222 OR2H2O95918 312 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 RPSAP08865 295 aaKnown RBP6.85□□□□□ -1.31
VRK1-206ENST00000557222 BCL3P20749 454 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 CD24P25063 80 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 HTR1FP30939 366 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 PTGFRP43088 359 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 SLC35B1P78383 322 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 DGCR2P98153 550 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 FLOT2Q14254 428 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 KHDC1LQ5JSQ8 128 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 PRAMEF5Q5TYX0 476 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 SSX6Q7RTT6 188 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 OR2W3Q7Z3T1 314 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 BCDIN3DQ7Z5W3 292 aaKnown RBP6.85□□□□□ -1.31
VRK1-206ENST00000557222 KCTD20Q7Z5Y7 419 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 SPATA24Q86W54 205 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 ZNF565Q8N9K5 539 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 OR9G1Q8NH87 305 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 MBOAT4Q96T53 435 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 P2RX4Q99571 388 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 ZNF286AQ9HBT8 521 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 IL36RNQ9UBH0 155 aa6.85□□□□□ -1.31
VRK1-206ENST00000557222 IGKV1-9A0A0C4DH69 117 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 KBTBD11-OT1A0A1B0GTJ5 212 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 LOC107986453A0A1B0GWG9 222 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 SIRPB1O00241 398 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 IGHG2P01859 326 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 CGB3P0DN86 165 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 CGB7P0DN87 165 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 DUSP1P28562 367 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 HOXD3P31249 432 aaPredicted RBP6.84□□□□□ -1.31
VRK1-206ENST00000557222 OR3A4PP47883 348 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 GLIPR1P48060 266 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 POU3F4P49335 361 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 RAB7AP51149 207 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 GYS2P54840 703 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 KRTAP10-2P60368 255 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 PAX5Q02548 391 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 AESQ08117 197 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 ODF4Q2M2E3 257 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 DNAL1Q4LDG9 190 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 C9orf152Q5JTZ5 239 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 KRBOX4Q5JUW0 171 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 KDM4DQ6B0I6 523 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 Q6P435 159 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 C10orf99Q6UWK7 81 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 FAM220AQ7Z4H9 259 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 OR8H3Q8N146 312 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 PRSS35Q8N3Z0 413 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 CCDC197Q8NCU1 140 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms