RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 RCN3Q96D15 328 aa4.29□□□□□ -1.72
ATXN3-245ENST00000556958 SLAMF6Q96DU3 332 aa4.29□□□□□ -1.72
ATXN3-245ENST00000556958 ZNF503Q96F45 646 aa4.29□□□□□ -1.72
ATXN3-245ENST00000556958 PGAM5Q96HS1 289 aa4.29□□□□□ -1.72
ATXN3-245ENST00000556958 ZNF488Q96MN9 340 aa4.29□□□□□ -1.72
ATXN3-245ENST00000556958 GPX7Q96SL4 187 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-245ENST00000556958 DGCR6LQ9BY27 220 aa4.29□□□□□ -1.72
ATXN3-245ENST00000556958 FGF23Q9GZV9 251 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-245ENST00000556958 SEBOXQ9HB31 216 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-245ENST00000556958 HES4Q9HCC6 221 aa4.29□□□□□ -1.72
ATXN3-245ENST00000556958 SDR39U1Q9NRG7 319 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-245ENST00000556958 PLSCR3Q9NRY6 295 aa4.29□□□□□ -1.72
ATXN3-245ENST00000556958 SLC25A37Q9NYZ2 338 aa4.29□□□□□ -1.72
ATXN3-245ENST00000556958 TMEM5Q9Y2B1 443 aa4.29□□□□□ -1.72
ATXN3-245ENST00000556958 DNAH6Q9C0G6 4158 aa4.29□□□□□ -1.72
ATXN3-245ENST00000556958 LRP1BQ9NZR2 4599 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 IZUMO1RA6ND01 250 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 TRPC5OSA6NMA1 111 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 ZNF785A8K8V0 405 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 J3QR06 171 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 LGALS9O00182 355 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 CDC42EP2O14613 210 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 AIREO43918 545 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 SCGB1D2O95969 90 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 IFNA14P01570 189 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 IGHV3-11P01762 117 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 HOXB9P17482 250 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-245ENST00000556958 ACKR3P25106 362 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 NFYBP25208 207 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 CD1BP29016 333 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 PTGFRP43088 359 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 NANOS2P60321 138 aaKnown RBP4.28□□□□□ -1.72
ATXN3-245ENST00000556958 TMEM267Q0VDI3 215 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-245ENST00000556958 SF3A3Q12874 501 aaKnown RBP eCLIP4.28□□□□□ -1.72
ATXN3-245ENST00000556958 TRAM2Q15035 370 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 GUCA2BQ16661 112 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 MOGAT2Q3SYC2 334 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 CEP78Q5JTW2 689 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 C1orf134Q5TEV5 83 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 ZNF730Q6ZMV8 503 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 MOB3CQ70IA8 216 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 KRT74Q7RTS7 529 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 ANGPTL5Q86XS5 388 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 IZUMO1Q8IYV9 350 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 RDH10Q8IZV5 341 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 LINC00471Q8N535 108 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 Q8N6K4 173 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 TCTEX1D1Q8N7M0 179 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 FAM86B1Q8N7N1 296 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 OR10X1Q8NGY0 326 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 NRG4Q8WWG1 115 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 FRZBQ92765 325 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 ATP6V1G3Q96LB4 118 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 ERMAPQ96PL5 475 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-245ENST00000556958 NMNAT3Q96T66 252 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 FNDC11Q9BVV2 318 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 EGLN3Q9H6Z9 239 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 RPRD1BQ9NQG5 326 aaKnown RBP4.28□□□□□ -1.72
ATXN3-245ENST00000556958 ZNF355PQ9NSJ1 428 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 PEMTQ9UBM1 199 aa4.28□□□□□ -1.72
ATXN3-245ENST00000556958 DNAH5Q8TE73 4624 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 IGHV3-72A0A0B4J1Y9 119 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 IGHV1-3A0A0C4DH29 117 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 SDHDO14521 159 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 UBDO15205 165 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 ATP8B1O43520 1251 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 TMEM127O75204 238 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 CSN3P07498 182 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 ATP6V1B1P15313 513 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 RPS27P42677 84 aaKnown RBP4.27□□□□□ -1.73
ATXN3-245ENST00000556958 MFAP2P55001 183 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 SYNJ2BPP57105 145 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 ZNF121P58317 390 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-245ENST00000556958 ERVK11-1P61568 191 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 ZNF816Q0VGE8 651 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-245ENST00000556958 ANKRD55Q3KP44 614 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 HSP90B2PQ58FF3 399 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 ZNF684Q5T5D7 378 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 PLCXD3Q63HM9 321 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 FAHD1Q6P587 224 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 SLC16A12Q6ZSM3 486 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 MBOAT2Q6ZWT7 520 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 PRSS45Q7RTY3 260 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-245ENST00000556958 MSRB3Q8IXL7 192 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 ENTHD1Q8IYW4 607 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 CENPSQ8N2Z9 138 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 TAMM41Q96BW9 452 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 TLCD1Q96CP7 247 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 PRRC1Q96M27 445 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 C20orf27Q9GZN8 174 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 SLA2Q9H6Q3 261 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 PARP11Q9NR21 331 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 INTS9Q9NV88 658 aaKnown RBP4.27□□□□□ -1.73
ATXN3-245ENST00000556958 THAP1Q9NVV9 213 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 MRPL22Q9NWU5 206 aaKnown RBP4.27□□□□□ -1.73
ATXN3-245ENST00000556958 VAPAQ9P0L0 249 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 CD300AQ9UGN4 299 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 RNF150Q9ULK6 438 aa4.27□□□□□ -1.73
ATXN3-245ENST00000556958 FOXA2Q9Y261 457 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms