RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 RNF7Q9UBF6 113 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 RAB22AQ9UL26 194 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 PPP1R3CQ9UQK1 317 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 ST3GAL6Q9Y274 331 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 MRPS7Q9Y2R9 242 aaKnown RBP4.42□□□□□ -1.7
ATXN3-244ENST00000556898 NOP16Q9Y3C1 178 aaKnown RBP4.42□□□□□ -1.7
ATXN3-244ENST00000556898 PEX16Q9Y5Y5 336 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 ETV7Q9Y603 341 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 V9GYH0 126 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 CADP27708 2225 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 FLNAP21333 2647 aaKnown RBP4.42□□□□□ -1.7
ATXN3-244ENST00000556898 NBEAL1Q6ZS30 2694 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 ATRQ13535 2644 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 IGKV1D-17A0A075B6S4 117 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 TRAV39A0A0B4J263 110 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 TRAV24A0A0B4J272 114 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 IGHV1-69-2A0A0G2JMI3 117 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 UBE2QL1A1L167 161 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 MEIOCA2RUB1 952 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 FABP12A6NFH5 140 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 RFPL4AA6NLU0 287 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 SRRM5B3KS81 715 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 RFPL4AL1F8VTS6 287 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 H7C417 338 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 LANCL1O43813 399 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 SSX4O60224 188 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 NOS1APO75052 506 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-244ENST00000556898 HAND1O96004 215 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 CYB5AP00167 134 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 HLA-DQB1P01920 261 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 APOA1P02647 267 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 UBBP0CG47 229 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 PSG2P11465 335 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 GTF2F2P13984 249 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 DAOP14920 347 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 PAX1P15863 534 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 BLVRBP30043 206 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-244ENST00000556898 S100A5P33763 92 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 GABRA2P47869 451 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 PITPNBP48739 271 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 PTH2RP49190 550 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 RBM11P57052 281 aaKnown RBP4.41□□□□□ -1.7
ATXN3-244ENST00000556898 TAS2R20P59543 309 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 FGF12P61328 243 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 COL10A1Q03692 680 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 MZT1Q08AG7 82 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 IL18Q14116 193 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 ZMYND11Q15326 602 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 ZNF79Q15937 498 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 PCGF3Q3KNV8 242 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 ZNF260Q3ZCT1 412 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 ELP2Q6IA86 826 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 FAM131AQ6UXB0 335 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 Q6ZPA2 131 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 C6orf201Q7Z4U5 140 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 LRRC28Q86X40 367 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-244ENST00000556898 FAM90A1Q86YD7 464 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 FAM89BQ8N5H3 189 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 ZNF525Q8N782 197 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 FAM216BQ8N7L0 139 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 TPRX1Q8N7U7 411 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 CLRN3Q8NCR9 226 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 Q8NFD4 153 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 OR4S1Q8NGB4 309 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 OR11L1Q8NGX0 322 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 OR10R2Q8NGX6 335 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 OR10Z1Q8NGY1 313 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 KCNG3Q8TAE7 436 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 PLPPR1Q8TBJ4 325 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 MAFIPQ8WZ33 124 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 RDH5Q92781 318 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 CPNE2Q96FN4 548 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-244ENST00000556898 WDFY2Q96P53 400 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 GAFA1Q96PS6 74 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 TSC22D3Q99576 134 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 CCL13Q99616 98 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 SDHCQ99643 169 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-244ENST00000556898 SOSTQ9BQB4 213 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 SULT4A1Q9BR01 284 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 DCTN5Q9BTE1 182 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 FAAP24Q9BTP7 215 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 PECRQ9BY49 303 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 CHST6Q9GZX3 395 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 RAB1BQ9H0U4 201 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 CST11Q9H112 138 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 ABCG5Q9H222 651 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 HEATR1Q9H583 2144 aaKnown RBP4.41□□□□□ -1.7
ATXN3-244ENST00000556898 NARFLQ9H6Q4 476 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 AUNIPQ9H7T9 357 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 NLKQ9UBE8 527 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 GHRLQ9UBU3 117 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 AK3Q9UIJ7 227 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 ZNF222Q9UK12 451 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 POLDIP2Q9Y2S7 368 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 KCNK7Q9Y2U2 307 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 WIPI2Q9Y4P8 454 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 MAB21L2Q9Y586 359 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 A3GALT2U3KPV4 340 aa4.41□□□□□ -1.7
ATXN3-244ENST00000556898 MAP1AP78559 2803 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-244ENST00000556898 NSD1Q96L73 2696 aaPredicted RBP4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms